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Preparing PhD defense
🧬
Preparing PhD defense

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@bioconda @biocore-ntnu @snakemake-workflows

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  1. pyranges/pyranges_1.x pyranges/pyranges_1.x Public

    PyRanges as a DataFrame subclass.

    Python 13 2

  2. pyranges/pyranges pyranges/pyranges Public

    Performant Pythonic GenomicRanges

    Python 447 47

  3. pyranges/ncls pyranges/ncls Public

    The Nested Containment List for Python. Basically a static interval-tree that is silly fast for both construction and lookups.

    C 216 21

  4. wdecoster/methplotlib wdecoster/methplotlib Public

    Plotting tools for nanopore methylation data

    Python 91 13

  5. biocore-ntnu/epic2 biocore-ntnu/epic2 Public

    Ultraperformant reimplementation of SICER

    Cython 56 9

  6. pyranges/pyrle pyranges/pyrle Public

    Numerical Run Length Encoding and Arithmetic in Cython

    Python 17 3