Ruff update

[jessekrubin]

my word salad:

• update ruff version(s) and run fmt and fixes as well as ignore things till we know dgpy would be fine with the fixes
• add cicd for python 39,310,311,312,313
• use uv setup in cicd

ai word salad here:

This pull request includes several updates to the CI configuration, test assertions, and dependency versions. The most important changes include adding a matrix of Python versions for testing, updating pre-commit hooks, and modifying assertion formatting in test files.

CI Configuration Updates:

• .github/workflows/dgpy-libs-ci.yml: Added a matrix of Python versions (3.9, 3.10, 3.11, 3.12, 3.13) for testing and updated the setup for uv installation.

Dependency Updates:

• .pre-commit-config.yaml: Updated the ruff-pre-commit hook version from v0.8.4 to v0.9.0.

Test Assertion Formatting:

• libs/h5/tests/test_exports.py: Simplified assertion formatting in test_h5_core_exports and test_h5_info_exports functions. [1] [2]
• libs/requires/tests/test_shed.py: Simplified assertion formatting in test_all_sorted function.
• libs/shellfish/tests/test_shellfish_exports.py: Simplified assertion formatting in _test_module_members_missing_from_all function.
• libs/xtyping/tests/test_xtyping.py: Simplified assertion formatting in test_xtyping_has_all_typing_extensions_members function. [1] [2]

Miscellaneous:

• pyproject.toml: Lowered the required Python version from 3.11 to 3.9 and added UP045 to lint ignore list. [1] [2]

[jessekrubin]

@dan-costello pushing this through!