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15 Open 167 Closed
15 Open 167 Closed
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Issues list

When using it, there is always a prompt showing "DeprecationWarning: Use shutil.which instead of find_executable if not find_executable("bedtools"):", and it can't output the correct results.
#189 opened Jan 8, 2025 by Anxiety010
3
Segmentation fault (core dumped)
#188 opened Oct 11, 2024 by KimberlyAcevedo
1
Need a python 3.9 or 3.10
#183 opened Apr 4, 2024 by dputhier
ERROR-get_tx_seq : No genes were found on chromosomes defined in fasta file.
#180 opened Mar 31, 2023 by yaskermezli
6
gtftk get_tx_seq: issue with chromosome names
#171 opened Dec 14, 2021 by dputhier
1
Need to synchronize requirement.txt and meta.yaml
#169 opened Nov 6, 2021 by dputhier
|-- 11:03-WARNING-profile : PlotnineError error, can not show group number: Aesthetics {'ha'} specified two times
#161 opened Jun 17, 2021 by dputhier
2
Completion is erratic
#111 opened Sep 20, 2019 by dputhier
Add tests with dataset mini_real_ens enhancement New feature or request
#109 opened Jul 31, 2019 by dputhier
Add a command-wise argument to convert (chr)MT into (chr)M new_feature A totally new feature
#32 opened Nov 20, 2018 by dputhier
divergent / convergent list of transcript enhancement New feature or request
#11 opened Jun 11, 2018 by dputhier
1
Improving the detection/annotation of alternative splicing events new_feature A totally new feature
#9 opened Jun 11, 2018 by dputhier
Select most common tss among transcript new_feature A totally new feature
#5 opened Jun 11, 2018 by dputhier
Blast output to GTF new_feature A totally new feature
#4 opened Jun 11, 2018 by dputhier
1
split command new_feature A totally new feature
#2 opened Jun 11, 2018 by dputhier
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