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Modeling phenotype-lactate discordance. Ongoing study begun as part of my practcium at the Harvard Chan School.

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Predictive Modeling of Lactate-Phenotype Discordance

C.V. Cosgriff, MIT Critical Data

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The goal of this work is to build a predictive model for lactate-phenotype discordance. This is ongoing work and some of the files are subject to change. The portion of this project written up to 5/2018 represents my practcium work for the completion of a Masters of Public Health in Quantitiave Methods at Harvard Chan School.

This repository is organized as follows:

  • Extraction: contains a notebook and requisite scripts for extacting cohort data from the eICU database
  • EDA: contains a notebook with an exploratory analysis of the cohort as well as a notebook examining the association between lactate discordance and mortality. (Note on mortality: As this was examined after the initial extract, this file performs a database pull to attain mortality status.)
  • Classifier: contains a notebook which documents the construction of a classifier

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Modeling phenotype-lactate discordance. Ongoing study begun as part of my practcium at the Harvard Chan School.

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