Add/ecp copa exampm (#35)

* wip to add exaMPM

Signed-off-by: vsoch <[email protected]>

.github/workflows/docker-builds.yaml

@@ -22,6 +22,7 @@ jobs:
                ["hpl-spack", "ghcr.io/converged-computing/metric-hpl-spack:latest"],
                ["hpl", "ghcr.io/converged-computing/metric-hpl:latest"],
                ["ior", "ghcr.io/converged-computing/metric-ior:latest"],
+               ["exaMPM", "ghcr.io/converged-computing/metric-exampm:latest"],
                ["cabanaPIC", "ghcr.io/converged-computing/metric-cabanapic:latest"],
                ["charmpp", "ghcr.io/converged-computing/metric-charmpp:latest"],
                ["qmcpack", "ghcr.io/converged-computing/metric-qmcpack:latest"],

exaMPM/Dockerfile

@@ -0,0 +1,82 @@
+ARG tag=latest
+FROM ubuntu:${tag}
+
+# see run details: https://github.com/ECP-copa/ExaMPM/wiki/Run
+
+ENV DEBIAN_FRONTEND=noninteractive
+RUN apt-get update && \
+    apt-get -qq install -y --no-install-recommends \
+        openssh-client openssh-server \
+        locales \
+        ca-certificates \
+        curl \
+        wget \
+        libhdf5-serial-dev \
+        libhdf5-mpi-dev  \
+        apt-utils \
+        cmake \
+        clang \
+        clang-format \
+        doxygen \
+        mpich \
+        libmpich-dev \
+        git \
+        jq \
+        build-essential \
+        python3-pip \
+        unzip \
+        libgtest-dev && \
+    rm -rf /var/lib/apt/lists/*
+
+ENV KOKKOS_SRC_DIR=/opt/kokkos
+ENV KOKKOS_INSTALL_DIR=$KOKKOS_SRC_DIR/build/install
+ENV MAKE_CXX_FLAG="MPICXX=mpic++"
+
+RUN python3 -m pip install clang-format
+RUN git clone https://github.com/kokkos/kokkos.git /opt/kokkos && \
+    cd /opt/kokkos && \
+    mkdir build && cd build && \
+    cmake -D CMAKE_BUILD_TYPE="Release" \
+      -D CMAKE_INSTALL_PREFIX=$KOKKOS_INSTALL_DIR \
+      -D Kokkos_ENABLE_OPENMP=ON \
+      -D Kokkos_ENABLE_SERIAL=ON .. && \
+      make install
+
+ENV CABANA_INSTALL_DIR=/opt/Cabana/build/install
+RUN wget https://github.com/ECP-copa/Cabana/archive/refs/tags/0.6.1.zip && \
+    unzip 0.6.1.zip && \
+    mv Cabana-0.6.1/ /opt/Cabana && \
+    cd /opt/Cabana && \
+    mkdir build && cd build && \
+    cmake \
+      -D CMAKE_BUILD_TYPE="Release" \
+      -D CMAKE_PREFIX_PATH=$KOKKOS_INSTALL_DIR \
+      -D CMAKE_INSTALL_PREFIX="$CABANA_INSTALL_DIR" \
+      -D Cabana_REQUIRE_OPENMP=ON \
+      -D Cabana_ENABLE_EXAMPLES=ON \
+      -D Cabana_ENABLE_TESTING=ON \
+      -D Cabana_REQUIRE_HDF5=ON \
+      -D Cabana_ENABLE_PERFORMANCE_TESTING=OFF \
+      -D Cabana_ENABLE_CAJITA=ON .. && \
+    make install 
+
+# Install exaMPM
+RUN git clone https://github.com/ECP-copa/ExaMPM /opt/exaMPM && \
+    cd /opt/exaMPM && \
+    mkdir build && \
+    cd build && \
+    cmake -D CMAKE_BUILD_TYPE="Release" \
+      -D CMAKE_PREFIX_PATH=$CABANA_INSTALL_DIR \
+      -D CMAKE_INSTALL_PREFIX=install .. && \
+    make install
+
+WORKDIR /opt/exaMPM/build/examples
+
+# Hack for ssh for now...
+RUN echo "        LogLevel ERROR" >> /etc/ssh/ssh_config && \
+    echo "        StrictHostKeyChecking no" >> /etc/ssh/ssh_config && \
+    echo "        UserKnownHostsFile=/dev/null" >> /etc/ssh/ssh_config && \
+    cd /root && \
+    mkdir -p /run/sshd && \
+    ssh-keygen -t rsa -N "" -f /root/.ssh/id_rsa && chmod og+rX . && \
+    cd .ssh && cat id_rsa.pub > authorized_keys && chmod 644 authorized_keys