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v0.9.0

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@RalfG RalfG released this 01 May 13:14
· 2 commits to main since this release
v0.9.0
6e51896

Added

  • io: Read and write support for writing PSMs to Apache Parquet for efficient storage of PSM lists.
  • io.sage: Support for Sage results in Parquet format (new SageParquetReader, renamed SageReader to SageTSVReader).

Changed

  • Upgrade Pydantic dependency to v2. The PSM spectrum_id field is now always coerced to a string.
  • io.proteoscape: Use pyarrow to iteratively read from Parquet instead of first reading an entire dataframe with Pandas.
  • io.sage: Update compatibility to Sage v0.14
  • Remove temporary patch for caching Proforma modification resolvers (now in Pyteomics v4.7.2).

Full Changelog: v0.8.3...v0.9.0

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