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deeptime-ml/deeptime
deeptime-ml/deeptime PublicPython library for analysis of time series data including dimensionality reduction, clustering, and Markov model estimation
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markovmodel/PyEMMA
markovmodel/PyEMMA Public archive🚂 Python API for Emma's Markov Model Algorithms 🚂
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readdy/readdy
readdy/readdy PublicPython / C++ based particle reaction-diffusion simulator
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