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adamcantor22 committed Aug 14, 2024
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2 changes: 1 addition & 1 deletion mmeds/snakemake/rules/table_filtering.smk
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Expand Up @@ -40,5 +40,5 @@ rule filter_nans:
"qiime feature-table filter-samples "
"--i-table {input.feature_table} "
"--m-metadata-file {input.mapping_file} "
"--p-where \"[wildcards.category]!=\'nan\'\" "
"--p-where \"{wildcards.category}!=\'nan\'\" "
"--o-filtered-table {output}"

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