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Merged
merged 5 commits into from
Mar 21, 2025
Merged

Rebased LOFAR parallelism #372

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95e6e31
Rebased LOFAR parallelism
sstansill Mar 13, 2025
69172b7
Merge remote-tracking branch 'casangi/main' into add-lofar-parallelism
sstansill Mar 20, 2025
807f688
Change parallel interface
sstansill Mar 20, 2025
c361da2
Single dish bug fix
sstansill Mar 21, 2025
4640868
Update notebook
sstansill Mar 21, 2025
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8 changes: 4 additions & 4 deletions demo/demo.ipynb
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Expand Up @@ -1062,7 +1062,7 @@
},
{
"cell_type": "code",
"execution_count": 31,
"execution_count": null,
"metadata": {},
"outputs": [
{
Expand Down Expand Up @@ -1180,7 +1180,7 @@
" in_file=msv2_name,\n",
" out_file=convert_out,\n",
" overwrite=True,\n",
" parallel=True,\n",
" parallel_mode=\"partition\",\n",
")"
]
},
Expand Down Expand Up @@ -9357,7 +9357,7 @@
},
{
"cell_type": "code",
"execution_count": 32,
"execution_count": null,
"metadata": {},
"outputs": [
{
Expand Down Expand Up @@ -9746,7 +9746,7 @@
}
],
"source": [
"import numpy as np \n",
"import numpy as np\n",
"np.abs(ms_xds.VISIBILITY).max().compute()"
]
},
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40 changes: 20 additions & 20 deletions dev/review_fs/review_fs.ipynb
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Original file line number Diff line number Diff line change
Expand Up @@ -2,7 +2,7 @@
"cells": [
{
"cell_type": "code",
"execution_count": 3,
"execution_count": null,
"metadata": {},
"outputs": [
{
Expand Down Expand Up @@ -139,7 +139,7 @@
"source": [
"from toolviper.utils.data import download\n",
"download(file=\"ALMA_uid___A002_X1003af4_X75a3.split.avg.ms\") #ALMA Mosaic Ephmeris of the Sun.\n",
"download(file=\"VLBA_TL016B_split.ms\") \n",
"download(file=\"VLBA_TL016B_split.ms\")\n",
"download(file=\"Antennae_North.cal.lsrk.split.ms\")\n",
"download(file=\"SNR_G55_10s.split.ms\")\n",
"# download()"
Expand All @@ -154,7 +154,7 @@
},
{
"cell_type": "code",
"execution_count": 4,
"execution_count": null,
"metadata": {},
"outputs": [
{
Expand Down Expand Up @@ -312,7 +312,7 @@
" in_file=msv2_name,\n",
" out_file=convert_out,\n",
" overwrite=True,\n",
" parallel=False,\n",
" parallel_mode=\"none\",\n",
")\n",
"\n",
"from xradio.measurement_set import open_processing_set\n",
Expand Down Expand Up @@ -849,7 +849,7 @@
},
{
"cell_type": "code",
"execution_count": 6,
"execution_count": null,
"metadata": {},
"outputs": [
{
Expand Down Expand Up @@ -965,7 +965,7 @@
" in_file=msv2_name,\n",
" out_file=convert_out,\n",
" overwrite=True,\n",
" parallel=False,\n",
" parallel_mode=\"none\",\n",
" partition_scheme=[]\n",
")\n",
"\n",
Expand Down Expand Up @@ -1741,7 +1741,7 @@
" in_file=msv2_name,\n",
" out_file=convert_out,\n",
" overwrite=True,\n",
" parallel=False,\n",
" parallel_mode=\"none\",\n",
")\n",
"\n",
"from xradio.measurement_set import open_processing_set\n",
Expand Down Expand Up @@ -2714,7 +2714,7 @@
" in_file=msv2_name,\n",
" out_file=convert_out,\n",
" overwrite=True,\n",
" parallel=False,\n",
" parallel_mode=\"none\",\n",
" partition_scheme=[]\n",
")\n",
"\n",
Expand Down Expand Up @@ -3550,7 +3550,7 @@
},
{
"cell_type": "code",
"execution_count": 8,
"execution_count": null,
"metadata": {},
"outputs": [
{
Expand Down Expand Up @@ -3882,7 +3882,7 @@
" in_file=msv2_name,\n",
" out_file=convert_out,\n",
" overwrite=True,\n",
" parallel=False,\n",
" parallel_mode=\"none\",\n",
")\n",
"\n",
"from xradio.measurement_set import open_processing_set\n",
Expand Down Expand Up @@ -4476,7 +4476,7 @@
},
{
"cell_type": "code",
"execution_count": 10,
"execution_count": null,
"metadata": {},
"outputs": [
{
Expand Down Expand Up @@ -4646,7 +4646,7 @@
" in_file=msv2_name,\n",
" out_file=convert_out,\n",
" overwrite=True,\n",
" parallel=False,\n",
" parallel_mode=\"none\",\n",
" partition_scheme=[]\n",
")\n",
"\n",
Expand Down Expand Up @@ -5244,7 +5244,7 @@
},
{
"cell_type": "code",
"execution_count": 12,
"execution_count": null,
"metadata": {},
"outputs": [
{
Expand Down Expand Up @@ -5644,7 +5644,7 @@
" out_file=convert_out,\n",
" overwrite=True,\n",
" ephemeris_interpolate=True,\n",
" parallel=False,\n",
" parallel_mode=\"none\",\n",
")\n",
"\n",
"from xradio.measurement_set import open_processing_set\n",
Expand Down Expand Up @@ -6700,7 +6700,7 @@
},
{
"cell_type": "code",
"execution_count": 14,
"execution_count": null,
"metadata": {},
"outputs": [
{
Expand Down Expand Up @@ -7190,7 +7190,7 @@
" in_file=msv2_name,\n",
" out_file=convert_out,\n",
" overwrite=True,\n",
" parallel=False,\n",
" parallel_mode=\"none\",\n",
" partition_scheme=[]\n",
")\n",
"\n",
Expand All @@ -7201,7 +7201,7 @@
},
{
"cell_type": "code",
"execution_count": 15,
"execution_count": null,
"metadata": {},
"outputs": [
{
Expand Down Expand Up @@ -7773,7 +7773,7 @@
}
],
"source": [
"ps[\"ALMA_uid___A002_X1003af4_X75a3.split.avg_09\"].VISIBILITY.field_and_source_xds "
"ps[\"ALMA_uid___A002_X1003af4_X75a3.split.avg_09\"].VISIBILITY.field_and_source_xds"
]
},
{
Expand Down Expand Up @@ -10462,7 +10462,7 @@
},
{
"cell_type": "code",
"execution_count": 19,
"execution_count": null,
"metadata": {},
"outputs": [
{
Expand Down Expand Up @@ -11658,7 +11658,7 @@
" in_file=msv2_name,\n",
" out_file=convert_out,\n",
" overwrite=True,\n",
" parallel=False,\n",
" parallel_mode=\"none\",\n",
" ephemeris_interpolate=True,\n",
" partition_scheme=[]\n",
")\n",
Expand Down
4 changes: 2 additions & 2 deletions docs/source/measurement_set/guides/ALMA_SD.ipynb
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Expand Up @@ -928,7 +928,7 @@
},
{
"cell_type": "code",
"execution_count": 6,
"execution_count": null,
"metadata": {},
"outputs": [
{
Expand Down Expand Up @@ -967,7 +967,7 @@
"convert_msv2_to_processing_set(\n",
" in_file=ms_file,\n",
" out_file=ps_store,\n",
" parallel=True,\n",
" parallel_mode=\"partition\",\n",
" overwrite=True,\n",
")"
]
Expand Down
4 changes: 2 additions & 2 deletions docs/source/measurement_set/guides/ALMA_ephemeris.ipynb
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Expand Up @@ -121,7 +121,7 @@
},
{
"cell_type": "code",
"execution_count": 3,
"execution_count": null,
"id": "ee52d124-2c17-450b-879f-1f86f0ae265c",
"metadata": {},
"outputs": [
Expand Down Expand Up @@ -210,7 +210,7 @@
"convert_msv2_to_processing_set(\n",
" in_file=ms_file,\n",
" out_file=outfile,\n",
" parallel=False,\n",
" parallel_mode=\"none\",\n",
" overwrite=True,\n",
" main_chunksize=main_chunksize,\n",
")"
Expand Down
4 changes: 2 additions & 2 deletions docs/source/measurement_set/guides/GBT_single_dish.ipynb
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Original file line number Diff line number Diff line change
Expand Up @@ -119,7 +119,7 @@
},
{
"cell_type": "code",
"execution_count": 3,
"execution_count": null,
"id": "ee52d124-2c17-450b-879f-1f86f0ae265c",
"metadata": {},
"outputs": [
Expand All @@ -145,7 +145,7 @@
"convert_msv2_to_processing_set(\n",
" in_file=ms_file,\n",
" out_file=outfile,\n",
" parallel=False,\n",
" parallel_mode=\"none\",\n",
" overwrite=True,\n",
" main_chunksize=main_chunksize,\n",
")"
Expand Down
4 changes: 2 additions & 2 deletions docs/source/measurement_set/guides/GMRT.ipynb
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Expand Up @@ -109,7 +109,7 @@
},
{
"cell_type": "code",
"execution_count": 13,
"execution_count": null,
"id": "87431f1b-b94d-442a-88b4-936f74be530c",
"metadata": {},
"outputs": [
Expand All @@ -132,7 +132,7 @@
"convert_msv2_to_processing_set(\n",
" in_file=ms_file,\n",
" out_file=outfile,\n",
" parallel=False,\n",
" parallel_mode=\"none\",\n",
" overwrite=True,\n",
" main_chunksize=main_chunksize,\n",
")"
Expand Down
4 changes: 2 additions & 2 deletions docs/source/measurement_set/guides/LOFAR.ipynb
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Expand Up @@ -123,7 +123,7 @@
},
{
"cell_type": "code",
"execution_count": 15,
"execution_count": null,
"id": "ee52d124-2c17-450b-879f-1f86f0ae265c",
"metadata": {},
"outputs": [
Expand All @@ -148,7 +148,7 @@
"convert_msv2_to_processing_set(\n",
" in_file=ms_file,\n",
" out_file=outfile,\n",
" parallel=False,\n",
" parallel_mode=\"none\",\n",
" overwrite=True,\n",
" main_chunksize=main_chunksize,\n",
")"
Expand Down
4 changes: 2 additions & 2 deletions docs/source/measurement_set/guides/MeerKAT.ipynb
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Expand Up @@ -123,7 +123,7 @@
},
{
"cell_type": "code",
"execution_count": 15,
"execution_count": null,
"id": "ee52d124-2c17-450b-879f-1f86f0ae265c",
"metadata": {},
"outputs": [
Expand Down Expand Up @@ -151,7 +151,7 @@
"convert_msv2_to_processing_set(\n",
" in_file=ms_file,\n",
" out_file=outfile,\n",
" parallel=False,\n",
" parallel_mode=\"none\",\n",
" overwrite=True,\n",
" main_chunksize=main_chunksize,\n",
")"
Expand Down
4 changes: 2 additions & 2 deletions docs/source/measurement_set/guides/SKA_mid.ipynb
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Expand Up @@ -123,7 +123,7 @@
},
{
"cell_type": "code",
"execution_count": 9,
"execution_count": null,
"id": "ee52d124-2c17-450b-879f-1f86f0ae265c",
"metadata": {},
"outputs": [
Expand All @@ -149,7 +149,7 @@
"convert_msv2_to_processing_set(\n",
" in_file=ms_file,\n",
" out_file=outfile,\n",
" parallel=False,\n",
" parallel_mode=\"none\",\n",
" overwrite=True,\n",
" main_chunksize=main_chunksize,\n",
")"
Expand Down
4 changes: 2 additions & 2 deletions docs/source/measurement_set/guides/VLBA.ipynb
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Expand Up @@ -139,7 +139,7 @@
},
{
"cell_type": "code",
"execution_count": 4,
"execution_count": null,
"id": "ee52d124-2c17-450b-879f-1f86f0ae265c",
"metadata": {},
"outputs": [
Expand Down Expand Up @@ -174,7 +174,7 @@
"convert_msv2_to_processing_set(\n",
" in_file=ms_file,\n",
" out_file=outfile,\n",
" parallel=False,\n",
" parallel_mode=\"none\",\n",
" overwrite=True,\n",
" main_chunksize=main_chunksize,\n",
")"
Expand Down
4 changes: 2 additions & 2 deletions docs/source/measurement_set/guides/VLBI.ipynb
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Expand Up @@ -133,7 +133,7 @@
},
{
"cell_type": "code",
"execution_count": 3,
"execution_count": null,
"id": "ee52d124-2c17-450b-879f-1f86f0ae265c",
"metadata": {},
"outputs": [
Expand Down Expand Up @@ -168,7 +168,7 @@
"convert_msv2_to_processing_set(\n",
" in_file=ms_file,\n",
" out_file=outfile,\n",
" parallel=False,\n",
" parallel_mode=\"none\",\n",
" overwrite=True,\n",
" main_chunksize=main_chunksize,\n",
")"
Expand Down
4 changes: 2 additions & 2 deletions docs/source/measurement_set/guides/ngEHT.ipynb
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Expand Up @@ -136,7 +136,7 @@
},
{
"cell_type": "code",
"execution_count": 16,
"execution_count": null,
"id": "ee52d124-2c17-450b-879f-1f86f0ae265c",
"metadata": {},
"outputs": [
Expand Down Expand Up @@ -165,7 +165,7 @@
"convert_msv2_to_processing_set(\n",
" in_file=ms_file,\n",
" out_file=outfile,\n",
" parallel=False,\n",
" parallel_mode=\"none\",\n",
" overwrite=True,\n",
" main_chunksize=main_chunksize,\n",
")"
Expand Down
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