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bwbioinfo/README.md

Hi My name is Nicholas!

Bioinformatician, Data Analyst, Systems Developper

About Me

I have been developing a diverse skill set in bioinformatics and data analysis, focusing on the analysis of RNA and DNA Sequencing data sets and offering a programatic support role to the laboratory personnel. I have worked with next generation sequencing technologies, and various LIMS and workflow systems. I also have developed the ability to use various project management tools ( e.g. KanBoard, Asana ) to maintain a collaborative, organized and efficient environment.

My proficiency in applying a range of computational methods and tools allows me to deliver valuable results to research projects and collaborate effectively with multidisciplinary teams. By developing and optimizing bioinformatics workflows, I have successfully enhanced data analysis efficiency and ensured the accuracy and reproducibility of findings.

Beyond my technical expertise, I have developed my ability to communicate scientific concepts to diverse audiences including verbally, graphically and using interactive tools. This skill has enabled me to establish meaningful collaborations with members of my team and external stakeholders. I firmly believe that open and clear communication is a key to driving impactful discoveries.

Skills

Python rlang JavaScript Git React NextJs NodeJS MongoDB MySQL Django Docker Linux MacOS

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  1. KEGGAPI.jl Public

    Julia API for KEGG

    Julia 5 1

  2. nanolims Public

    A lightweight LIMS system

    JavaScript 1 1

  3. docker-cwl-template Public template

    Template repository for creating containers and cwl run files

    1

440 contributions in the last year

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Activity overview

Contributed to chusj-pigu/wf-modules, bwbioinfo/modules, bwbioinfo/KEGGAPI.jl and 48 other repositories
Loading A graph representing bwbioinfo's contributions from February 18, 2024 to February 24, 2025. The contributions are 97% commits, 1% pull requests, 2% issues, 0% code review.

Contribution activity

February 2025

Created 7 commits in 2 repositories

Created an issue in yuankunzhang/charming that received 5 comments

Plotting of large data sets fails

When plotting ~200M or more points, the plotting fails with the following error : <--- Last few GCs ---> [4015030:0x5b7f43c3f000] 5983 ms: Mark-Co…

5 comments
5 contributions in private repositories Feb 5 – Feb 7
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