Skip to content

Actions: broadinstitute/viral-pipelines

Actions

All workflows

Actions

Loading...
Loading

Showing runs from all workflows
1,267 workflow runs
1,267 workflow runs

Filter by Event

Filter by Status

Filter by Branch

Filter by Actor

PR #557
CodeQL #89: by dpark01
September 19, 2024 01:57 1m 49s
September 19, 2024 01:57 1m 49s
nextclade updates
viral-pipelines CI #2580: Pull request #557 opened by dpark01
September 19, 2024 01:57 In progress dp-nextclade
September 19, 2024 01:57 In progress
bump nextclade and pangolin; update taxid->nextclade list
viral-pipelines CI #2579: Commit bd7c76d pushed by dpark01
September 19, 2024 01:53 In progress dp-nextclade
September 19, 2024 01:53 In progress
PR #556
CodeQL #88: by dpark01
September 18, 2024 22:54 1m 51s
September 18, 2024 22:54 1m 51s
bump upstream docker images
viral-pipelines CI #2578: Pull request #556 opened by dpark01
September 18, 2024 22:54 27m 49s dp-bump-core
September 18, 2024 22:54 27m 49s
bump viral-core to 2.3.4 and viral-assembly to 2.3.4.0
viral-pipelines CI #2577: Commit 42dca48 pushed by dpark01
September 18, 2024 22:52 27m 9s dp-bump-core
September 18, 2024 22:52 27m 9s
Merge pull request #555 from broadinstitute/dp-demux
viral-pipelines CI #2576: Commit 55c81a0 pushed by dpark01
September 18, 2024 20:20 27m 18s dp-bump-core
September 18, 2024 20:20 27m 18s
PR #554
CodeQL #87: by dpark01
September 18, 2024 20:20 1m 59s
September 18, 2024 20:20 1m 59s
scaffold multitaxa: drop empty assembly output rows
viral-pipelines CI #2575: Pull request #554 synchronize by dpark01
September 18, 2024 20:20 27m 12s dp-scaffold
September 18, 2024 20:20 27m 12s
the genbank workflow now hits live NCBI databases -- remove it from C…
viral-pipelines CI #2574: Commit 425a4db pushed by dpark01
September 18, 2024 20:20 26m 23s dp-scaffold
September 18, 2024 20:20 26m 23s
Merge pull request #555 from broadinstitute/dp-demux
viral-pipelines CI #2573: Commit 55c81a0 pushed by dpark01
September 18, 2024 20:19 27m 52s master
September 18, 2024 20:19 27m 52s
Push on master
CodeQL #86: by github-advanced-security bot
September 18, 2024 20:19 2m 14s
September 18, 2024 20:19 2m 14s
demux_deplete fixes/updates
viral-pipelines CI #2572: Pull request #555 opened by dpark01
September 18, 2024 14:22 33m 26s dp-demux
September 18, 2024 14:22 33m 26s
PR #555
CodeQL #85: by dpark01
September 18, 2024 14:22 2m 16s
September 18, 2024 14:22 2m 16s
PR #554
CodeQL #84: by dpark01
September 18, 2024 14:21 1m 43s
September 18, 2024 14:21 1m 43s
scaffold multitaxa: drop empty assembly output rows
viral-pipelines CI #2571: Pull request #554 opened by dpark01
September 18, 2024 14:21 26m 25s dp-scaffold
September 18, 2024 14:21 26m 25s
the genbank workflow now hits live NCBI databases -- remove it from C…
viral-pipelines CI #2570: Commit 3a50994 pushed by dpark01
September 18, 2024 13:56 25m 47s dp-scaffold
September 18, 2024 13:56 25m 47s
drop zero length assemblies
viral-pipelines CI #2569: Commit 9017298 pushed by dpark01
September 18, 2024 13:22 28m 13s dp-scaffold
September 18, 2024 13:22 28m 13s
missing python import
viral-pipelines CI #2568: Commit f6942c3 pushed by dpark01
September 18, 2024 13:15 28m 9s dp-demux
September 18, 2024 13:15 28m 9s
bugfix for when many previous libraries exist
viral-pipelines CI #2567: Commit e39c7d1 pushed by dpark01
September 17, 2024 20:13 33m 10s dp-demux
September 17, 2024 20:13 33m 10s
Scheduled
CodeQL #83: by github-advanced-security bot
September 13, 2024 12:02 1m 46s
September 13, 2024 12:02 1m 46s
Scheduled
CodeQL #82: by github-advanced-security bot
September 6, 2024 12:02 1m 46s
September 6, 2024 12:02 1m 46s
oops
viral-pipelines CI #2566: Commit 4eb51c2 pushed by dpark01
September 5, 2024 21:19 26m 46s dp-genbank
September 5, 2024 21:19 26m 46s
add new outputs to assembly table: assembly_method_version, biosample…
viral-pipelines CI #2565: Commit 2137472 pushed by dpark01
September 5, 2024 21:12 2m 52s dp-genbank
September 5, 2024 21:12 2m 52s
oops: add actual workflow
viral-pipelines CI #2564: Commit f6d2105 pushed by dpark01
September 5, 2024 14:04 28m 9s dp-genbank
September 5, 2024 14:04 28m 9s