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brainglobe · Jul 2, 2020 · 6100b35 · 6100b35
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diff --git a/.gitbook/assets/aba (1).png b/.gitbook/assets/aba (1).png
diff --git a/.gitbook/assets/celegans.png b/.gitbook/assets/celegans.png
diff --git a/.gitbook/assets/cells.png b/.gitbook/assets/cells.png
diff --git a/.gitbook/assets/gene_expr.png b/.gitbook/assets/gene_expr.png
diff --git a/.gitbook/assets/humanbrainexp.png b/.gitbook/assets/humanbrainexp.png
diff --git a/.gitbook/assets/ibdb.png b/.gitbook/assets/ibdb.png
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diff --git a/.gitbook/assets/neurons.png b/.gitbook/assets/neurons.png
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diff --git a/.gitbook/assets/neurons_transparent.png b/.gitbook/assets/neurons_transparent.png
diff --git a/.gitbook/assets/neuropixel.png b/.gitbook/assets/neuropixel.png
diff --git a/.gitbook/assets/optic_fiber.png b/.gitbook/assets/optic_fiber.png
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diff --git a/.gitbook/assets/skull (1).png b/.gitbook/assets/skull (1).png
diff --git a/.gitbook/assets/skull.png b/.gitbook/assets/skull.png
diff --git a/.gitbook/assets/streamlines.png b/.gitbook/assets/streamlines.png
diff --git a/.gitbook/assets/streamlinespretty.png b/.gitbook/assets/streamlinespretty.png
diff --git a/.gitbook/assets/surface.png b/.gitbook/assets/surface.png
diff --git a/.gitbook/assets/tractography (1).png b/.gitbook/assets/tractography (1).png
diff --git a/.gitbook/assets/tractography (2).png b/.gitbook/assets/tractography (2).png
diff --git a/.gitbook/assets/tractography.png b/.gitbook/assets/tractography.png
diff --git a/README.md b/README.md
@@ -4,22 +4,22 @@ description: A brief overview of brainrender functionality
 
 # Introduction
 
-![](.gitbook/assets/aba%20%281%29.png)
-
 ## Welcome to the `brainrender` docs
 
-**`brainrender` is a python package for the visualization of three dimensional neuro anatomical data. It can be used to render data from publicly available dataset \(e.g. Allen Brain atlas\) as well as user generated experimental data. The goal of `brainrender` is to facilitate the exploration and dissemination of neuroanatomical data by providing a user-friendly platform to create high-quality 3D renderings.**
+**`brainrender` is a python package for the visualization of three dimensional neuro-anatomical data. It can be used to render data from publicly available data set \(e.g. Allen Brain atlas\) as well as user generated experimental data. The goal of `brainrender` is to facilitate the exploration and dissemination of neuro-anatomical data by providing a user-friendly platform to create high-quality 3D renderings.**
 
 
 
 While developing `brainrender` we aimed to create a flexible and easy-to-use tool for the neuroscience community to use for all their rendering needs.
 
 For this reason:
 
-* we've build upon \(brainglobe\)\[linkmissing\]'s atlas API, ensuring that you can use `brainrender` to visualise data from a wide range of species. 
+* we've build upon \(brainglobe\)\[linkmissing\]'s atlas API, ensuring that you can use `brainrender` to visualize data from a wide range of species. 
 * we've created a simple and intuitive interface to download and render data from publicly available datasets like the Allen Mouse Connectome and Janelia's Mouse Light projects.
-* we've built a ton of functionality into `brainrender` to ensure that we can cover all of your visualisation needs. If we missed something, and you'd like to see a new feature added, get in touch on [github](https://github.com/BrancoLab/BrainRender)!
-* we're using `vedo`, a powerful `vtk`-based rendering package in python. `vedo`'s flexibility ensures that you can render in brainrender any 3d object you can put into a `.obj` or `.stl` file. It's therefore easier than ever to add your custom experimental implant to the renderings. 
+* we've built a ton of functionality into `brainrender` to ensure that we can cover all of your visualization needs \(e.g. see these [images](overview/gallery.md) and [examples](overview/examples.md)\). If we missed something or you'd like to see a new feature added, get in touch on [github](https://github.com/BrancoLab/BrainRender)!
+* we're using [`vedo`](https://github.com/marcomusy/vedo), a powerful vtk-based rendering package in python. `vedo`'s flexibility ensures that you can render in `brainrender` any 3d design you can put into a `.obj` or `.stl` file. It's therefore easier than ever to add your custom experimental implant to the renderings. 
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+
 
 #### Getting in touch
 

diff --git a/overview/gallery.md b/overview/gallery.md
@@ -4,5 +4,37 @@ description: Some examples of the kind of images you can create in brainrender
 
 # Gallery
 
-to add - a gallery of images created with brainrend
+![The mouse brain and skull](../.gitbook/assets/skull%20%281%29.png)
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+![Labelled cells in several cortical and sub cortical areas](../.gitbook/assets/cells.png)
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+![Location of an optic fiber implanted in the thalamus](../.gitbook/assets/optic_fiber.png)
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+![Location of an implanted neuropixel probe in the cortex and thalamus](../.gitbook/assets/neuropixel.png)
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+![The brain of  Schistocerca gregaria](../.gitbook/assets/ibdb.png)
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+![Gene expression levels for Cacna2d1 across the mouse cortex. ](../.gitbook/assets/gene_expr.png)
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+![Tractography visualisation of projections to the Zona Incerta \(data: the Allen Mouse Connectome project\)](../.gitbook/assets/tractography.png)
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+![Layer 5b neurons in the mouse motor cortex. Sagittal view.](../.gitbook/assets/neurons.png)
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+![The C.Elegans connectome \(data courtesy of Daniel Witvliet and co-authors\)](../.gitbook/assets/celegans.png)
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+![Streamlines visualization of projections from the motor cortex in the mouse brain](../.gitbook/assets/streamlinespretty.png)
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+![Views of the human brain](../.gitbook/assets/humanbrainexp.png)
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