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Add new tools built by the community (#291)
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adamltyson authored Feb 21, 2025
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Expand Up @@ -51,6 +51,16 @@ ClearFinder is a graphical user interface that allows users without programming
vvasp (pronounced wasp) is a python library for 3D viewing of spatially defined neuroscience data (histology, probe trajectories, neuron locations, etc.). It uses the default PyVista plotter and is fully interoperable with PyVista functionality.
- [GitHub repository](https://github.com/spkware/vvasp)

## cuisto
cuisto is a Python package for histological quantification of objects in reference atlas regions.
cuisto uses data exported from QuPath used with ABBA to pool data and derive, average and display metrics.
- [GitHub repository](https://github.com/TeamNCMC/cuisto)
- [Documentation](https://teamncmc.github.io/cuisto)

## BlenderBrain
BlenderBrain allows the user to visualise atlas data from the BrainGlobe Atlas API in Blender
- [GitHub repository](https://github.com/ArtemKirsanov/BlenderBrain)

:::{hint}
if you have developed any software using BrainGlobe tools, please [let us know](../contact) and we can advertise it here.
:::

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