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Update Crabs #51394

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Update Crabs #51394

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fe65111
first try to update crabs
famosab Oct 15, 2024
e791e92
Add run_exports
martin-g Oct 15, 2024
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37 changes: 20 additions & 17 deletions recipes/crabs/meta.yaml
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Original file line number Diff line number Diff line change
@@ -1,30 +1,33 @@
{% set name = "crabs" %}
{% set version = "1.0.3" %}
{% set sha256 = "9ebdf217c0f4069a7678d458b87199c1a2594879c704f0ef91e6049bfc0fae9b" %}

package:
name: crabs
version: "0.1.1"
name: {{ name|lower }}
version: {{ version }}

source:
url: https://github.com/gjeunen/reference_database_creator/files/8028374/crabs_v0.1.1.tar.gz
md5: 6c2e82fb5e191cb750c5d6a41fa24b61
url: https://github.com/gjeunen/reference_database_creator/archive/refs/tags/v{{ version }}.tar.gz
sha256: {{ sha256 }}

build:
number: 0
script: "{{ PYTHON }} -m pip install . -vv"
script: "{{ PYTHON }} -m pip install . --no-deps -vvv"
noarch: python
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run_exports:
- {{ pin_subpackage(name, max_pin="x.x") }}

requirements:
build:

host:
- python >=3.6.10
- pip
- argparse
- biopython =1.78
- tqdm
- numpy
- pandas >=0.23.4
- matplotlib-base
- wget

# - argparse
# - biopython =1.78
# - tqdm
# - numpy
# - pandas >=0.23.4
# - matplotlib-base
# - wget =1.21.3
run:
- python >=3.6.10
- argparse
Expand All @@ -33,8 +36,8 @@ requirements:
- numpy
- pandas >=0.23.4
- matplotlib-base
- wget
- muscle >=3.8.31
- wget =1.21.3
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Why exactly 1.21.3 ?

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not sure - just copied that from the other PR. I think we can go for the latest version here.

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I guess any new semver compatible version should be OK.
Pinning with exact versions is usually not recommended.

- muscle =3.8.31
- cutadapt >=3.4
- vsearch >=2.13.3

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