Update mashpit to 0.9.8 (#52611)

* Update mashpit to 0.9.8 * add setuptools * fix typo * pin numpy to <2 * Update mashpit to 0.9.8 * Update meta.yaml --------- Co-authored-by: Joshua Zhuang <[email protected]>
bioconda · Dec 5, 2024 · 2910e89 · 2910e89
1 parent 770a1a5
commit 2910e89
Showing 1 changed file with 12 additions and 8 deletions.
diff --git a/recipes/mashpit/meta.yaml b/recipes/mashpit/meta.yaml
@@ -1,40 +1,44 @@
-{% set version = "0.9.7" %}
+{% set version = "0.9.8" %}
 
 package:
   name: mashpit
   version: '{{ version }}'
 
 source:
   url: https://github.com/tongzhouxu/mashpit/archive/refs/tags/v{{ version }}.tar.gz
-  sha256: 4f93e00f8ff5cdb1eb81bc5cf01db824dbb8f54e67dbe9aab910b21fdd38fbed
+  sha256: 3c5fee1971a375197eaf7f79c959abdb5dda44dc4362a259a907b0cd70b2c1d9
 
 build:
   noarch: python
   script: {{ PYTHON }} -m pip install --no-deps --no-build-isolation --no-cache-dir . -vvv
   number: 0
+  entry_points:
+    - mashpit = mashpit.mashpit:main
   run_exports:
     - {{ pin_subpackage("mashpit", max_pin="x.x") }}
 
 requirements:
   host:
     - python >=3.8
     - pip
+    - setuptools
   run:
-    - biopython =1.78
-    - dask >=2024.1
-    - flask >=3.0
+    - biopython >=1.83
+    - dask-core >=2024.1
+    - flask >=3.0.3
     - ncbi-datasets-cli >=16.10
     - ncbi-datasets-pylib >=16.6.0
-    - numpy >=1.19.5
+    - numpy <2.0.0
     - python >=3.8
-    - pandas >=1.1.5
+    - pandas >=2.0.3
     - requests
     - scikit-bio
     - scipy >=1.0
     - screed >=1.0.5
     - sourmash >=4.6.1
     - tqdm
     - phytreeviz
+    - psutil
 
 test:
   commands:
@@ -45,5 +49,5 @@ about:
   license: "GPL-2.0-or-later"
   license_family: GPL2
   license_file: LICENSE
-  summary: Sketch-based surveillance platform
+  summary: "Sketch-based surveillance platform."
   dev_url: https://github.com/tongzhouxu/mashpit