Ensembl transcript ENST00000617537.5 sequence is genomic not cdna #75
Description
Web page Reports that the sequence is 2385 bases long
Ensembl API is in agreement:
In [25]: import requests
In [26]: url = "https://rest.ensembl.org/sequence/id/ENST00000617537?type=cdna"
In [27]: r = requests.get(url, headers={"Content-Type": "application/json"}, timeout=60)
In [28]: len(r.json()["seq"])
Out[28]: 2385
SeqRepo returns much longer sequence:
In [20]: from hgvs.dataproviders.seqfetcher import SeqFetcher
In [21]: sf = SeqFetcher()
In [22]: seq = sf.fetch_seq("ENST00000617537.5")
In [23]: len(seq)
Out[23]: 211554