v0.1.2

0.1.2 (2026-02-25)

Bug Fixes

• candidate regions clumping (#57) (6aadd92)
• move release-PR guard to step level and drop --no-install (#61) (0405e71)
• skip implicit pixi install before lockfile regeneration (#59) (c8c8787)

v0.1.1

0.1.1 (2026-02-05)

Bug Fixes

• close unclosed file handles in consensus module (#54) (d2b2876)

v0.1.0

What's Changed

• chore: add muc1 examples by @holtgrewe in #3
• feat: migrate code from old repository by @holtgrewe in #7
• docs: documenting vcf creation (#9) by @holtgrewe in #10
• refactor: delete unused code by @vinzenzmay in #12
• refactor: removed pbsv annotations files by @vinzenzmay in #15
• docs: added-description-how-to-run-on-real-data by @vinzenzmay in #16
• docs: Update README with BioRXiv preprint link by @vinzenzmay in #18
• refactor: use ruff for both formatting and linting by @tedil in #17
• refactor: reordered by @vinzenzmay in #20
• refactor: removed unused scripts by @vinzenzmay in #22
• refactor: removed unsued and legacy packages by @vinzenzmay in #24
• fix: allowed mismatching chr names in mononucleotide filtering for re… by @vinzenzmay in #30
• feat: 29 support different hg38 flavours by @vinzenzmay in #32
• fix: HG30 sv calling feasible due to performance gains by @vinzenzmay in #28
• fix: support different hg38 flavours by @vinzenzmay in #35
• feat: add Docker builds (#37) by @holtgrewe in #38
• ci: cleanup Docker images (#39) by @holtgrewe in #40
• ci: implement release-please (#41) by @holtgrewe in #42
• chore(main): release 0.0.0 by @varfish-bot in #43
• fix: add --directory flag to snakemake to prevent writing to docker home by @Copilot in #47
• fix: inversion calling (34) by @vinzenzmay in #36

New Contributors

• @vinzenzmay made their first contribution in #12
• @tedil made their first contribution in #17
• @varfish-bot made their first contribution in #43
• @Copilot made their first contribution in #47

Full Changelog: v0.0.0...v0.1.0

v0.0.0

0.0.0 (2025-12-21)

Features

• add Docker builds (#37) (#38) (55c61df)
• migrate code from old repository (#7) (2c68d5f)
• support different hg38 flavours (#29) (ee7f71b)

Bug Fixes

• allowed mismatching chr names in mononucleotide filtering for re… (#30) (3821344)
• HG30 sv calling feasible due to performance gains (#28) (6d9ae6c)

Documentation

• added-description-how-to-run-on-real-data (#16) (f34ed06)
• documenting vcf creation (#9) (#10) (9335a4a)
• illustration for README (#2) (678a52a)
• Update README with BioRXiv preprint link (#18) (c261517)

Continuous Integration

• add update-lockfile CI workflow (#44) (ed35688)