Releases: bcgsc/pori_ipr_api
v7.0.2
BugFixes:
- DEVSU-1643 - Changing report status removes signature
v7.0.1
BugFixes:
- DEVSU-1639 - Update gene name minimum length
v7.0.0
Breaking Changes:
- DEVSU-1526 - Move acl to middleware
- DEVSU-1626 - Convert all models to camel case
BugFixes:
- DEVSU-1133 - Return 400 bad request when invalid report state
- DEVSU-1594 - Remove authentication for spec routes
- DEVSU-1616 - Switch back to forked mode because of pm2 log bug in cluster mode
- DEVSU-1621 - Add gene parameter to probe results in swagger doc
New Features:
- DEVSU-1520 - Add pharmacogenomic section
- DEVSU-1549 - Add ability to track updates to reports
- DEVSU-1558 - Add new probe test information fields
- DEVSU-1561 - Add new fields to kb-matches table
- DEVSU-1563 - Add routes and tests for probe test information
- DEVSU-1617 - Create report-manager role
- DEVSU-1618 - Add endpoint to get earliest signoff for a report
- DEVSU-1624 - Add the ability to search genes
Improvements:
- DEVSU-1531 - Add instructions for manual db inserts to README
- DEVSU-1557 - Cache copy variants and expression variants
- DEVSU-1562 - Refactor project routes
- DEVSU-1566 - Update the information in the README file
- DEVSU-1576 - Add more specialized intersection function
- DEVSU-1577 - Update includesAll helper function
- DEVSU-1578 - Add caching for genes and small mutations
- DEVSU-1598 - Cache more report sections
- DEVSU-1600 - Update create report to upload variant sections asynchronously
- DEVSU-1602 - Add patient information tests
- DEVSU-1603 - Add gene tests
- DEVSU-1604 - Add genomic alterations tests
- DEVSU-1605 - Add probe results tests
- DEVSU-1606 - Add mavis tests
- DEVSU-1613 - Add appendix tests
- DEVSU-1614 - Fix package vulnerabilities
- DEVSU-1615 - Remove foreverjs code
- DEVSU-1622 - Replace deprecated request libraries
- DEVSU-1623 - Remove moment library
- DEVSU-1629 - Cache germline variants and reviews
- DEVSU-1633 - Cache probe results
- DEVSU-1634 - Cache structural variants
v6.2.3
v6.3.0
New Features:
DEVSU-1461 - Add support for affected copies
Improvements:
DEVSU-496 - Update image routes to now return an array of results
DEVSU-1142 - Update swagger routes to match tags
DEVSU-1482 - Update user routes
DEVSU-1498 - Update db indicies
DEVSU-1510 - Cluster using PM2
DEVSU-1511 - Cache report summary sections
DEVSU-1515 - Update caching to be more efficient
DEVSU-1518 - Remove analysis report structure/class
v6.2.2
BugFixes:
DEVSU-1524 - Fix cropping of uploaded images
v6.2.1
BugFixes:
DEVSU-1501 - Fix cache not clearing when unbinding a user from a report
v6.2.0
BugFixes:
DEVSU-1476 - Fix broken pathway analysis routes
DEVSU-1480 - Fix broken copy variant tests
Improvements:
DEVSU-1488 - Update all image processing to use a single library (sharpjs)
DEVSU-1491 - Update dependencies and remove deprecated body parser
DEVSU-1492 - Remove Node v10 support
DEVSU-1494 - Increase the time values are cached for
DEVSU-1497 - Cache user details
DEVSU-1499 - Replace join using report ident with where using report id
No ticket - Add link to main PORI repo in readme file
v6.1.0
BugFixes:
DEVSU-1439 - Get graphkb and germline tests running on github
DEVSU-1477 - Fix connection bug (increase max db connections)
DEVSU-1479 - Skip broken copy variant tests
New Features:
DEVSU-1423 - Add support for uploading a pathway legend image
DEVSU-1471 - Add DELETE endpoint for report images
Improvements:
DEVSU-1451 - Refactor reports GET endpoint
DEVSU-1453 - Update Sequelize to v6
DEVSU-1455 - Make API compatible with Node v14
DEVSU-1458 - Add caching for genomic and germline reports
DEVSU-1465 - Enable clustering of node server
DEVSU-1474 - Add buffer support for uploading report images
DEVSU-1478 - Separate user data and user metadata
DEVSU-1485 - Create function to generate cache keys