Fix Phred Calculation #131
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lcoombe
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Nov 13, 2024
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Previous Phred average calculation is in correct. It was done by calculating the arithmetic mean of the Phred scores. This is incorrect because Phred are log scaled. To properly calculate the average, the phred score needs to be de-loged to probabilities first.
Has implication for GoldPolish and therefore GoldPolish-Target