fix render pars + include rshinydashboard draft v#13
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fix render pars + include rshinydashboard draft v#13
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lpantano
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Apr 28, 2025
| import::from(data.table, fread) | ||
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| deg_annotated <- fread("example_results/full_sample_type_normal_vs_tumor_pathways.csv") %>% |
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add test data to bcbio-test-data
lpantano
reviewed
Apr 28, 2025
| deg_lists <- map(deg_lists, \(d) setdiff(strsplit(d, split = ",")[[1]], "")) | ||
| geneset_list <- deg_lists[lengths(deg_lists) >= 5] | ||
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| volcano_data <- fread("example_results/full_sample_type_normal_vs_tumor_deg.csv") %>% |
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add all needed files in the top with variables names so it can be easy changed by real-data
lpantano
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Apr 28, 2025
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Add some readme/code on how to prepare the data
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run_markdown.Rto have it consistent with the rmarkdownexample_results.zip