Releases: bartongroup/fenr
Releases · bartongroup/fenr
fenr 1.1.2
- Bug fixes, examples need on_error = "warn"
fenr 1.1.1
- version increment
fenr 1.1.0
- First update after Bioconductor release
- Implemented changes to prevent the package from build/check fail, if one of the remote servers is not responding
- Moved from
httr
tohttr2
- Tests and examples now generate warnings in case of server failure
- Added tests for behaviour in case of a non-responsive server
- Extended test coverage to 100%, except for the interactive example
fenr 0.99.7
- Minor changes to prepare for Bioconductor release
- Reverting temporarily to readr version 1 to circumvent a vroom 1.6.4 bug
fenr 0.99.6
In response to reviewer's comments
- The wording in the vignette was adjusted to more clearly convey the purpose of the package to users
- Rewritten the description in DESCRIPTION file to clearly convey the purpose of the package to users
BioPlanet seems defunct
- Removed BioPlanet for good, as their webpage is continuously down and the maintainer is not responding
Minor adjustments to speed up building and testing
- Removed KEGG from interactive example to speed up vignette building (GO and Reactome are sufficient for a simple example)
- Replaced yeast with simpler organisms in Wiki and KEGG tests to speed up testing
- Replaced yeast with simpler organisms in Wiki and KEGG examples to speed up checking
fenr 0.99.5
Major overhaul for Bioconductor.
fenr 0.99.4
fenr 0.99.4
- Taking
BiocCheck
new warnings into account: adding@return
to data roxygens.
fenr 0.99.3
fenr 0.99.3
- Continuing issues with access to BioPlanet.
fetch_bp
example is now markeddonotrun
and testingfetch_bp
is removed to ensure smooth build and check even when BioPlanet server is down.
fenr 0.99.2
- BioPlanet's tripod.nih.gov SSL certificate seems to be fixed, so reversing to the original read_csv code.
fenr 0.99.1
- BioPlanet database vanished from internet and there is no sign of it coming back. Removing all BioPlanet-related code and replacing BioPlanet with GO in the vignette and examples (this, alas, makes it longer to check).
- OK, it is back, but I keep GO examples and vignettes.
- Minor improvements to documentation.