edited config file. changed OC version

analysis/11_fragsys_ML_create_models.ipynb

@@ -23,22 +23,22 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 2,
+   "execution_count": null,
    "metadata": {},
-   "outputs": [
-    {
-     "name": "stderr",
-     "output_type": "stream",
-     "text": [
-      "2023-11-28 15:21:54.896409: I tensorflow/core/platform/cpu_feature_guard.cc:193] This TensorFlow binary is optimized with oneAPI Deep Neural Network Library (oneDNN) to use the following CPU instructions in performance-critical operations:  SSE4.1 SSE4.2 AVX AVX2 FMA\n",
-      "To enable them in other operations, rebuild TensorFlow with the appropriate compiler flags.\n"
-     ]
-    }
-   ],
+   "outputs": [],
    "source": [
     "from fragsys_ml import *"
    ]
   },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "metadata": {},
+   "outputs": [],
+   "source": [
+    "import os"
+   ]
+  },
   {
    "cell_type": "markdown",
    "metadata": {},
@@ -48,7 +48,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 3,
+   "execution_count": null,
    "metadata": {},
    "outputs": [],
    "source": [
@@ -4965,7 +4965,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 7,
+   "execution_count": null,
    "metadata": {},
    "outputs": [],
    "source": [
@@ -5761,9 +5761,9 @@
  ],
  "metadata": {
   "kernelspec": {
-   "display_name": "Python [conda env:deep_learning]",
+   "display_name": "Python [conda env:deep_learning_env]",
    "language": "python",
-   "name": "conda-env-deep_learning-py"
+   "name": "conda-env-deep_learning_env-py"
   },
   "language_info": {
    "codemirror_mode": {

fragsys_config.txt

@@ -2,7 +2,7 @@
 
 [binaries]
 dssp_bin = /path/to/miniconda/envs/dssp_env/bin/mkdssp
-oc_bin = ./../oc-2.1a/oc
+oc_bin = ./../oc-2.1b/oc
 stamp_bin = ./../stamp.4.4.2/bin/operative_system/stamp
 transform_bin = ./../stamp.4.4.2/bin/operative_system/transform
 clean_pdb_python_bin = /path/to/miniconda/envs/arpeggio_env/bin/python