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need to add the website!
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atakaragoz committed Dec 2, 2024
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Realizing that some of my labmates were interested in using our computing cluster for their own MRI data analysis, I decided to make a single page app to help them set up the preamble for their SLURM job scripts. I find that people tend to have difficulty remembering what all the SBATCH options are, so I thought it would be helpful to have a simple tool that would guide them through the process. When people are learning about neuroimaging preprocessing, they often have a bunch of other technical information to keep in mind. For many people, using the command line on the cluster is sort of foreign, bash scripts are not as common as they used to be, and thinking about job scripts is yet another thing to keep track of. Right now I also hard coded in a list of software modules that are available on the cluster, but in the future I would like to make this more dynamic.
Realizing that some of my labmates were interested in using our computing cluster for their own MRI data analysis, I decided to make a single page app to help them set up the preamble for their SLURM job scripts (you can find it [here](https://clusthelp.abkara.xyz/)). I find that people tend to have difficulty remembering what all the SBATCH options are, so I thought it would be helpful to have a simple tool that would guide them through the process. When people are learning about neuroimaging preprocessing, they often have a bunch of other technical information to keep in mind. For many people, using the command line on the cluster is sort of foreign, bash scripts are not as common as they used to be, and thinking about job scripts is yet another thing to keep track of. Right now I also hard coded in a list of software modules that are available on the cluster, but in the future I would like to make this more dynamic.

### The app
The app is built with simple HTML, CSS, and JavaScript. It allows users to select their partition, specify number of nodes and memory per core as well as select a list of software modules to load (from a pre-defined list that is usually used in our lab).
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