GitHub - ashander/phenoecosim: Simulate evolutionary, plastic and demographic responses to changing environments (moving optima)

ashander / phenoecosim Public

Notifications You must be signed in to change notification settings
Fork 0
Star 1

Simulate evolutionary, plastic and demographic responses to changing environments (moving optima)

Name		Name	Last commit message	Last commit date
Latest commit History 41 Commits
R		R
inst		inst
man		man
src		src
tests		tests
.Rbuildignore		.Rbuildignore
.dockerignore		.dockerignore
.gitignore		.gitignore
Changelog.md		Changelog.md
DESCRIPTION		DESCRIPTION
Dockerfile		Dockerfile
LICENSE		LICENSE
NAMESPACE		NAMESPACE
README.Rmd		README.Rmd

Repository files navigation

phenoecosim
===========

## Simulations of eco-evo trait and demographic dynamics under changing environments

Jaime Ashander and Luis-Miguel Chevin


Simulate evolutionary, plastic, and ecological responses to
changing environments, including discrete shifts and constantly
moving optima.

Built with [Armadillo](http://arma.sourceforge.net/) and [Rcpp](http://www.rcpp.org/) (via RcppArmadillo package).

Please cite as below and use the DOI: [![DOI](https://zenodo.org/badge/17403/ashander/phenoecosim.svg)](https://zenodo.org/badge/latestdoi/17403/ashander/phenoecosim)


>Jaime Ashander and Luis-Miguel Chevin (2015). phenoecosim: Simulations of eco-evo trait and demographic dynamics under changing environments.  R package version v0.2.4.

### Running in docker

This package includes a Dockerfile built on top of the rocker/rstudio image.
We have also hosted the image on dockerhub, so you can easily get an Rstudio
server setup for development running on the cloud:

```bash
docker run -d -p 80:8787 -e USER=<username> -e PASSWORD=<password> ashander/phenoecosim
```

Navigating to the public DNS of the server will give you an Rstudio login screen.

For further details [see the rocker wiki](https://github.com/rocker-org/rocker/wiki/Using-the-RStudio-image)