Pre v0.2.3.5

aravind-j · Feb 9, 2020 · 3891928 · 3891928
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diff --git a/PGRdup.pdf b/PGRdup.pdf
diff --git a/README.html b/README.html
diff --git a/README.md b/README.md
@@ -24,7 +24,7 @@ downloads](https://cranlogs.r-pkg.org/badges/grand-total/PGRdup?color=green)](ht
 [![Project Status:
 Inactive](http://www.repostatus.org/badges/latest/inactive.svg)](http://www.repostatus.org/#inactive)
 [![lifecycle](https://img.shields.io/badge/lifecycle-stable-brightgreen.svg)](https://www.tidyverse.org/lifecycle/#stable)
-[![Last-changedate](https://img.shields.io/badge/last%20change-2020--02--04-yellowgreen.svg)](https://github.com/aravind-j/PGRdup)
+[![Last-changedate](https://img.shields.io/badge/last%20change-2020--02--08-yellowgreen.svg)](https://github.com/aravind-j/PGRdup)
 [![Rdoc](http://www.rdocumentation.org/badges/version/PGRdup)](http://www.rdocumentation.org/packages/PGRdup)
 [![Zenodo
 DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.841963.svg)](https://doi.org/10.5281/zenodo.841963)

diff --git a/docs/articles/Introduction.html b/docs/articles/Introduction.html
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diff --git a/docs/articles/Introduction_files/figure-latex/unnamed-chunk-2-1.pdf b/docs/articles/Introduction_files/figure-latex/unnamed-chunk-2-1.pdf
diff --git a/docs/articles/bibliography.bibtex b/docs/articles/bibliography.bibtex
diff --git a/docs/articles/imgs/PGRdup.png b/docs/articles/imgs/PGRdup.png
diff --git a/docs/index.html b/docs/index.html
diff --git a/docs/jquery.sticky-kit.min.js b/docs/jquery.sticky-kit.min.js
diff --git a/docs/reference/DoubleMetaphone.html b/docs/reference/DoubleMetaphone.html
diff --git a/docs/reference/KWCounts-2.png b/docs/reference/KWCounts-2.png
diff --git a/docs/reference/KWCounts-3.png b/docs/reference/KWCounts-3.png
diff --git a/vignettes/Introduction.pdf b/vignettes/Introduction.pdf
diff --git a/vignettes/Introduction.tex b/vignettes/Introduction.tex
@@ -123,7 +123,7 @@
 \author{Aravind, J.\textsuperscript{1}, Radhamani, J.\textsuperscript{1},
 Kalyani Srinivasan\textsuperscript{1}, Ananda Subhash,
 B.\textsuperscript{2}, and Tyagi, R. K.\textsuperscript{1}}
-\date{2020-02-04}
+\date{2020-02-08}
 
 \begin{document}
 \maketitle
@@ -2445,29 +2445,30 @@ \subsection{Session Info}\label{session-info}}
 [5] diagram_1.6.4      shape_1.4.4       
 
 loaded via a namespace (and not attached):
- [1] Rcpp_1.0.3           stringdist_0.9.5.5   prettyunits_1.1.1   
- [4] ps_1.3.0             assertthat_0.2.1     rprojroot_1.3-2     
- [7] digest_0.6.23        packrat_0.5.0        R6_2.4.1            
-[10] backports_1.1.5      evaluate_0.14        highr_0.8           
-[13] httr_1.4.1           ggplot2_3.2.1        pillar_1.4.3        
-[16] rlang_0.4.3          curl_4.3             lazyeval_0.2.2      
-[19] rstudioapi_0.10      data.table_1.12.8    callr_3.4.1         
-[22] rmarkdown_2.1        labeling_0.3         desc_1.2.0          
-[25] devtools_2.2.1       stringr_1.4.0        igraph_1.2.4.2      
-[28] RCurl_1.95-4.12      munsell_0.5.0        compiler_4.0.0      
-[31] xfun_0.12            microbenchmark_1.4-7 pkgconfig_2.0.3     
-[34] pkgbuild_1.0.6       htmltools_0.4.0      tidyselect_0.2.5    
-[37] tibble_2.1.3         roxygen2_7.0.2       XML_3.99-0.3        
-[40] fansi_0.4.1          crayon_1.3.4         dplyr_0.8.3         
-[43] withr_2.1.2          bitops_1.0-6         grid_4.0.0          
-[46] gtable_0.3.0         lifecycle_0.1.0      magrittr_1.5        
-[49] scales_1.1.0         cli_2.0.1            stringi_1.4.5       
-[52] farver_2.0.3         fs_1.3.1             remotes_2.1.0       
-[55] testthat_2.3.1       xml2_1.2.2           ellipsis_0.3.0      
-[58] tools_4.0.0          glue_1.3.1           purrr_0.3.3         
-[61] processx_3.4.1       pkgload_1.0.2        parallel_4.0.0      
-[64] yaml_2.2.0           colorspace_1.4-1     sessioninfo_1.1.1   
-[67] memoise_1.1.0        knitr_1.27           usethis_1.5.1       
+ [1] httr_1.4.1           pkgload_1.0.2        microbenchmark_1.4-7
+ [4] assertthat_0.2.1     highr_0.8            yaml_2.2.0          
+ [7] remotes_2.1.0        sessioninfo_1.1.1    pillar_1.4.3        
+[10] backports_1.1.5      glue_1.3.1           digest_0.6.23       
+[13] colorspace_1.4-1     htmltools_0.4.0      XML_3.99-0.3        
+[16] pkgconfig_2.0.3      devtools_2.2.1       rcmdcheck_1.3.3     
+[19] purrr_0.3.3          scales_1.1.0         processx_3.4.1      
+[22] stringdist_0.9.5.5   tibble_2.1.3         farver_2.0.3        
+[25] ggplot2_3.2.1        usethis_1.5.1        ellipsis_0.3.0      
+[28] withr_2.1.2          lazyeval_0.2.2       cli_2.0.1           
+[31] magrittr_1.5         crayon_1.3.4         memoise_1.1.0       
+[34] evaluate_0.14        ps_1.3.0             fs_1.3.1            
+[37] fansi_0.4.1          xml2_1.2.2           pkgbuild_1.0.6      
+[40] tools_4.0.0          data.table_1.12.8    prettyunits_1.1.1   
+[43] lifecycle_0.1.0      stringr_1.4.0        xopen_1.0.0         
+[46] munsell_0.5.0        callr_3.4.1          packrat_0.5.0       
+[49] compiler_4.0.0       tinytex_0.19.2       rlang_0.4.3         
+[52] grid_4.0.0           RCurl_1.95-4.12      rstudioapi_0.10     
+[55] igraph_1.2.4.2       bitops_1.0-6         labeling_0.3        
+[58] rmarkdown_2.1        testthat_2.3.1       gtable_0.3.0        
+[61] roxygen2_7.0.2       curl_4.3             R6_2.4.1            
+[64] knitr_1.28           dplyr_0.8.3          rprojroot_1.3-2     
+[67] desc_1.2.0           stringi_1.4.5        parallel_4.0.0      
+[70] Rcpp_1.0.3           tidyselect_0.2.5     xfun_0.12           
 \end{verbatim}
 
 \hypertarget{references}{%