Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Add ResidualVisitor to compute residuals #1388

Open
wants to merge 29 commits into
base: main
Choose a base branch
from
Open
Show file tree
Hide file tree
Changes from 18 commits
Commits
Show all changes
29 commits
Select commit Hold shift + click to select a range
731542e
Create test_scan_count.py
tusharchou Nov 28, 2024
c6c971e
moved test_scan_count.py to tests
tusharchou Nov 28, 2024
da18837
implemented count in data scan
tusharchou Nov 28, 2024
3104a2f
tested table scan count in test_sql catalog
tusharchou Nov 28, 2024
c2740ea
refactoring
tusharchou Nov 28, 2024
90bca84
make lint
tusharchou Nov 28, 2024
f7202b9
Merge pull request #1 from tusharchou/gh-1223-count-rows-metadata-onl…
tusharchou Nov 28, 2024
c7205b3
Merge branch 'apache:main' into main
tusharchou Dec 2, 2024
09f9c10
Merge branch 'apache:main' into main
tusharchou Dec 11, 2024
1e9da22
Merge branch 'apache:main' into main
tusharchou Dec 18, 2024
3ab20d4
Merge branch 'apache:main' into main
tusharchou Dec 21, 2024
091c0af
implemeted residual_evaluator.py with tests
tusharchou Dec 24, 2024
3cd797d
added license
tusharchou Dec 24, 2024
6b0924e
fixed lint
tusharchou Dec 24, 2024
96cb4e9
fixed lint errors
tusharchou Dec 24, 2024
212c83b
Merge pull request #3 from tusharchou/gh-1223-metadata-only-row-count
tusharchou Dec 24, 2024
8bc65fa
Merge branch 'apache:main' into main
tusharchou Dec 30, 2024
8bb039f
Gh 1223 metadata only row count (#4)
tusharchou Dec 31, 2024
0019f92
Merge branch 'apache:main' into main
tusharchou Jan 4, 2025
a372a93
Merge branch 'apache:main' into main
tusharchou Jan 6, 2025
ab4c000
Gh 1223 metadata only row count (#5)
tusharchou Jan 6, 2025
f5a871b
Merge branch 'apache:main' into main
tusharchou Jan 18, 2025
8262780
Merge branch 'apache:main' into main
tusharchou Jan 27, 2025
899beb1
Merge branch 'apache:main' into main
tusharchou Jan 31, 2025
2575cb8
Resolving review comments (#6)
tusharchou Jan 31, 2025
557255b
Merge branch 'apache:main' into main
tusharchou Feb 5, 2025
2724856
Gh 1223 metadata only row count (#7)
tusharchou Feb 5, 2025
c9805f2
Merge branch 'apache:main' into main
tusharchou Feb 7, 2025
f46739e
Gh 1223 metadata only row count (#8)
tusharchou Feb 7, 2025
File filter

Filter by extension

Filter by extension

Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
247 changes: 247 additions & 0 deletions pyiceberg/expressions/residual_evaluator.py
Original file line number Diff line number Diff line change
@@ -0,0 +1,247 @@
# Licensed to the Apache Software Foundation (ASF) under one
# or more contributor license agreements. See the NOTICE file
# distributed with this work for additional information
# regarding copyright ownership. The ASF licenses this file
# to you under the Apache License, Version 2.0 (the
# "License"); you may not use this file except in compliance
# with the License. You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing,
# software distributed under the License is distributed on an
# "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
# KIND, either express or implied. See the License for the
# specific language governing permissions and limitations
# under the License.
from abc import ABC
from typing import Any, Set

from pyiceberg.expressions import And, Or
from pyiceberg.expressions.literals import Literal
from pyiceberg.expressions.visitors import (
AlwaysFalse,
AlwaysTrue,
BooleanExpression,
BoundBooleanExpressionVisitor,
BoundPredicate,
BoundTerm,
Not,
UnboundPredicate,
visit,
)
from pyiceberg.partitioning import PartitionSpec
from pyiceberg.schema import Schema
from pyiceberg.typedef import Record
from pyiceberg.types import L


class ResidualVisitor(BoundBooleanExpressionVisitor[BooleanExpression], ABC):
schema: Schema
spec: PartitionSpec
case_sensitive: bool

def __init__(self, schema: Schema, spec: PartitionSpec, case_sensitive: bool, expr: BooleanExpression):
self.schema = schema
self.spec = spec
self.case_sensitive = case_sensitive
self.expr = expr

def eval(self, partition_data: Record) -> BooleanExpression:
self.struct = partition_data
return visit(self.expr, visitor=self)

def visit_true(self) -> BooleanExpression:
return AlwaysTrue()

def visit_false(self) -> BooleanExpression:
return AlwaysFalse()

def visit_not(self, child_result: BooleanExpression) -> BooleanExpression:
return Not(child_result)

def visit_and(self, left_result: BooleanExpression, right_result: BooleanExpression) -> BooleanExpression:
return And(left_result, right_result)

def visit_or(self, left_result: BooleanExpression, right_result: BooleanExpression) -> BooleanExpression:
return Or(left_result, right_result)

def visit_is_null(self, term: BoundTerm[L]) -> BooleanExpression:
if term.eval(self.struct) is None:
return AlwaysTrue()
else:
return AlwaysFalse()

def visit_not_null(self, term: BoundTerm[L]) -> BooleanExpression:
if term.eval(self.struct) is not None:
return AlwaysTrue()
else:
return AlwaysFalse()

def visit_is_nan(self, term: BoundTerm[L]) -> BooleanExpression:
val = term.eval(self.struct)
if val is None:
return self.visit_true()
else:
return self.visit_false()

def visit_not_nan(self, term: BoundTerm[L]) -> BooleanExpression:
val = term.eval(self.struct)
if val is not None:
return self.visit_true()
else:
return self.visit_false()

def visit_less_than(self, term: BoundTerm[L], literal: Literal[L]) -> BooleanExpression:
if term.eval(self.struct) < literal.value:
return self.visit_true()
else:
return self.visit_false()

def visit_less_than_or_equal(self, term: BoundTerm[L], literal: Literal[L]) -> BooleanExpression:
if term.eval(self.struct) <= literal.value:
return self.visit_true()
else:
return self.visit_false()

def visit_greater_than(self, term: BoundTerm[L], literal: Literal[L]) -> BooleanExpression:
if term.eval(self.struct) > literal.value:
return self.visit_true()
else:
return self.visit_false()

def visit_greater_than_or_equal(self, term: BoundTerm[L], literal: Literal[L]) -> BooleanExpression:
if term.eval(self.struct) >= literal.value:
return self.visit_true()
else:
return self.visit_false()

def visit_equal(self, term: BoundTerm[L], literal: Literal[L]) -> BooleanExpression:
if term.eval(self.struct) == literal.value:
return self.visit_true()
else:
return self.visit_false()

def visit_not_equal(self, term: BoundTerm[L], literal: Literal[L]) -> BooleanExpression:
if term.eval(self.struct) != literal.value:
return self.visit_true()
else:
return self.visit_false()

def visit_in(self, term: BoundTerm[L], literals: Set[L]) -> BooleanExpression:
if term.eval(self.struct) in literals:
return self.visit_true()
else:
return self.visit_false()

def visit_not_in(self, term: BoundTerm[L], literals: Set[L]) -> BooleanExpression:
if term.eval(self.struct) not in literals:
return self.visit_true()
else:
return self.visit_false()

def visit_starts_with(self, term: BoundTerm[L], literal: Literal[L]) -> BooleanExpression:
eval_res = term.eval(self.struct)
if eval_res is not None and str(eval_res).startswith(str(literal.value)):
return AlwaysTrue()
else:
return AlwaysFalse()

def visit_not_starts_with(self, term: BoundTerm[L], literal: Literal[L]) -> BooleanExpression:
if not self.visit_starts_with(term, literal):
return AlwaysTrue()
else:
return AlwaysFalse()

def visit_bound_predicate(self, predicate: BoundPredicate[Any]) -> BooleanExpression:
"""
If there is no strict projection or if it evaluates to false, then return the predicate.

Get the strict projection and inclusive projection of this predicate in partition data,
then use them to determine whether to return the original predicate. The strict projection
returns true iff the original predicate would have returned true, so the predicate can be
eliminated if the strict projection evaluates to true. Similarly the inclusive projection
returns false iff the original predicate would have returned false, so the predicate can
also be eliminated if the inclusive projection evaluates to false.

"""
parts = self.spec.fields_by_source_id(predicate.term.ref().field.field_id)
if parts == []:
return predicate

from pyiceberg.types import StructType

def struct_to_schema(struct: StructType) -> Schema:
return Schema(*[f for f in struct.fields])

for part in parts:
strict_projection = part.transform.strict_project(part.name, predicate)
strict_result = None

if strict_projection is not None:
bound = strict_projection.bind(struct_to_schema(self.spec.partition_type(self.schema)))
if isinstance(bound, BoundPredicate):
strict_result = super().visit_bound_predicate(bound)
else:
strict_result = bound

if strict_result is not None and isinstance(strict_result, AlwaysTrue):
return AlwaysTrue()

inclusive_projection = part.transform.project(part.name, predicate)
inclusive_result = None
if inclusive_projection is not None:
bound_inclusive = inclusive_projection.bind(struct_to_schema(self.spec.partition_type(self.schema)))
if isinstance(bound_inclusive, BoundPredicate):
# using predicate method specific to inclusive
inclusive_result = super().visit_bound_predicate(bound_inclusive)
else:
# if the result is not a predicate, then it must be a constant like alwaysTrue or
# alwaysFalse
inclusive_result = bound_inclusive
if inclusive_result is not None and isinstance(inclusive_result, AlwaysFalse):
return AlwaysFalse()

return predicate

def visit_unbound_predicate(self, predicate: UnboundPredicate[L]) -> BooleanExpression:
bound = predicate.bind(self.schema, case_sensitive=True)

if isinstance(bound, BoundPredicate):
bound_residual = self.visit_bound_predicate(predicate=bound)
# if isinstance(bound_residual, BooleanExpression):
if bound_residual not in (AlwaysFalse(), AlwaysTrue()):
# replace inclusive original unbound predicate
return predicate

# use the non-predicate residual (e.g. alwaysTrue)
return bound_residual

# if binding didn't result in a Predicate, return the expression
return bound


class ResidualEvaluator(ResidualVisitor):
def residual_for(self, partition_data: Record) -> BooleanExpression:
return self.eval(partition_data)


class UnpartitionedResidualEvaluator(ResidualEvaluator):
# Finds the residuals for an Expression the partitions in the given PartitionSpec
def __init__(self, schema: Schema, expr: BooleanExpression):
from pyiceberg.partitioning import UNPARTITIONED_PARTITION_SPEC

super().__init__(schema=schema, spec=UNPARTITIONED_PARTITION_SPEC, expr=expr, case_sensitive=False)
self.expr = expr

def residual_for(self, partition_data: Record) -> BooleanExpression:
return self.expr


def residual_evaluator_of(
spec: PartitionSpec, expr: BooleanExpression, case_sensitive: bool, schema: Schema
) -> ResidualEvaluator:
if len(spec.fields) != 0:
return ResidualEvaluator(spec=spec, expr=expr, schema=schema, case_sensitive=case_sensitive)
else:
return UnpartitionedResidualEvaluator(schema=schema, expr=expr)
42 changes: 40 additions & 2 deletions pyiceberg/table/__init__.py
Original file line number Diff line number Diff line change
Expand Up @@ -1328,6 +1328,9 @@ def filter(self: S, expr: Union[str, BooleanExpression]) -> S:
def with_case_sensitive(self: S, case_sensitive: bool = True) -> S:
return self.update(case_sensitive=case_sensitive)

@abstractmethod
def count(self) -> int: ...


class ScanTask(ABC):
pass
Expand All @@ -1341,19 +1344,21 @@ class FileScanTask(ScanTask):
delete_files: Set[DataFile]
start: int
length: int
residual: BooleanExpression

def __init__(
self,
data_file: DataFile,
delete_files: Optional[Set[DataFile]] = None,
start: Optional[int] = None,
length: Optional[int] = None,
residual: BooleanExpression = None
) -> None:
self.file = data_file
self.delete_files = delete_files or set()
self.start = start or 0
self.length = length or data_file.file_size_in_bytes

self.residual = residual

def _open_manifest(
io: FileIO,
Expand Down Expand Up @@ -1513,13 +1518,23 @@ def plan_files(self) -> Iterable[FileScanTask]:
else:
raise ValueError(f"Unknown DataFileContent ({data_file.content}): {manifest_entry}")



from pyiceberg.expressions.residual_evaluator import residual_evaluator_of
residual_evaluator = residual_evaluator_of(
spec=self.table_metadata.spec(),
expr=self.row_filter,
case_sensitive=self.case_sensitive,
schema=self.table_metadata.schema()
)
return [
FileScanTask(
data_entry.data_file,
data_file=data_entry.data_file,
delete_files=_match_deletes_to_data_file(
data_entry,
positional_delete_entries,
),
residual=residual_evaluator.residual_for(data_entry.data_file.partition)
)
for data_entry in data_entries
]
Expand Down Expand Up @@ -1594,6 +1609,29 @@ def to_ray(self) -> ray.data.dataset.Dataset:

return ray.data.from_arrow(self.to_arrow())

def count(self) -> int:
"""
Usage: calutates the total number of records in a Scan that haven't had positional deletes
"""
res = 0
# every task is a FileScanTask
tasks = self.plan_files()
tusharchou marked this conversation as resolved.
Show resolved Hide resolved

for task in tasks:
# task.residual is a Boolean Expression if the fiter condition is fully satisfied by the
# partition value and task.delete_files represents that positional delete haven't been merged yet
# hence those files have to read as a pyarrow table applying the filter and deletes
if task.residual == AlwaysTrue() and not len(task.delete_files):
Fokko marked this conversation as resolved.
Show resolved Hide resolved
# Every File has a metadata stat that stores the file record count
res += task.file.record_count
else:
tusharchou marked this conversation as resolved.
Show resolved Hide resolved
from pyiceberg.io.pyarrow import ArrowScan
tbl = ArrowScan(
self.table_metadata, self.io, self.projection(), self.row_filter, self.case_sensitive, self.limit
).to_table([task])
res += len(tbl)
return res
tusharchou marked this conversation as resolved.
Show resolved Hide resolved


@dataclass(frozen=True)
class WriteTask:
Expand Down
52 changes: 52 additions & 0 deletions tests/catalog/test_sql.py
Original file line number Diff line number Diff line change
Expand Up @@ -1360,6 +1360,58 @@ def test_append_table(catalog: SqlCatalog, table_schema_simple: Schema, table_id
assert df == table.scan().to_arrow()


@pytest.mark.parametrize(
"catalog",
[
lazy_fixture("catalog_memory"),
lazy_fixture("catalog_sqlite"),
lazy_fixture("catalog_sqlite_without_rowcount"),
lazy_fixture("catalog_sqlite_fsspec"),
],
)
@pytest.mark.parametrize(
"table_identifier",
[
lazy_fixture("random_table_identifier"),
lazy_fixture("random_hierarchical_identifier"),
lazy_fixture("random_table_identifier_with_catalog"),
],
)
def test_count_table(catalog: SqlCatalog, table_schema_simple: Schema, table_identifier: Identifier) -> None:
table_identifier_nocatalog = catalog._identifier_to_tuple_without_catalog(table_identifier)
namespace = Catalog.namespace_from(table_identifier_nocatalog)
catalog.create_namespace(namespace)
table = catalog.create_table(table_identifier, table_schema_simple)

df = pa.Table.from_pydict(
{
"foo": ["a"],
"bar": [1],
"baz": [True],
},
schema=schema_to_pyarrow(table_schema_simple),
)

table.append(df)

# new snapshot is written in APPEND mode
assert len(table.metadata.snapshots) == 1
assert table.metadata.snapshots[0].snapshot_id == table.metadata.current_snapshot_id
assert table.metadata.snapshots[0].parent_snapshot_id is None
assert table.metadata.snapshots[0].sequence_number == 1
assert table.metadata.snapshots[0].summary is not None
assert table.metadata.snapshots[0].summary.operation == Operation.APPEND
assert table.metadata.snapshots[0].summary["added-data-files"] == "1"
assert table.metadata.snapshots[0].summary["added-records"] == "1"
assert table.metadata.snapshots[0].summary["total-data-files"] == "1"
assert table.metadata.snapshots[0].summary["total-records"] == "1"
assert len(table.metadata.metadata_log) == 1

# read back the data
assert df == table.scan().to_arrow()
assert len(table.scan().to_arrow()) == table.scan().count()


@pytest.mark.parametrize(
"catalog",
[
Expand Down
Loading