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deps: bump the major-dependencies group with 7 updates #67

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Updates the requirements on arcgis, sqlalchemy, numpy, jupyterlab, jupyter-server, pytest-cov and pytest-mock to permit the latest version.
Updates arcgis to 2.2.0

Updates sqlalchemy to 2.0.21

Release notes

Sourced from sqlalchemy's releases.

2.0.21

Released: September 18, 2023

orm

  • [orm] [bug] Adjusted the ORM's interpretation of the "target" entity used within Update and Delete to not interfere with the target "from" object passed to the statement, such as when passing an ORM-mapped _orm.aliased construct that should be maintained within a phrase like "UPDATE FROM". Cases like ORM session synchonize using "SELECT" statements such as with MySQL/ MariaDB will still have issues with UPDATE/DELETE of this form so it's best to disable synchonize_session when using DML statements of this type.

    References: #10279

  • [orm] [bug] Added new capability to the _orm.selectin_polymorphic() loader option which allows other loader options to be bundled as siblings, referring to one of its subclasses, within the sub-options of parent loader option. Previously, this pattern was only supported if the _orm.selectin_polymorphic() were at the top level of the options for the query. See new documentation section for example.

    As part of this change, improved the behavior of the _orm.Load.selectin_polymorphic() method / loader strategy so that the subclass load does not load most already-loaded columns from the parent table, when the option is used against a class that is already being relationship-loaded. Previously, the logic to load only the subclass columns worked only for a top level class load.

    References: #10348

engine

  • [engine] [bug] Fixed a series of reflection issues affecting the PostgreSQL, MySQL/MariaDB, and SQLite dialects when reflecting foreign key constraints where the target column contained parenthesis in one or both of the table name or column name.

    References: #10275

sql

  • [sql] [usecase] Adjusted the _types.Enum datatype to accept an argument of None for the _types.Enum.length parameter, resulting in a VARCHAR or other textual type with no length in the resulting DDL. This

... (truncated)

Commits

Updates numpy to 1.26.0

Release notes

Sourced from numpy's releases.

v1.26.0

NumPy 1.26.0 Release Notes

The NumPy 1.26.0 release is a continuation of the 1.25.x release cycle with the addition of Python 3.12.0 support. Python 3.12 dropped distutils, consequently supporting it required finding a replacement for the setup.py/distutils based build system NumPy was using. We have chosen to use the Meson build system instead, and this is the first NumPy release supporting it. This is also the first release that supports Cython 3.0 in addition to retaining 0.29.X compatibility. Supporting those two upgrades was a large project, over 100 files have been touched in this release. The changelog doesn't capture the full extent of the work, special thanks to Ralf Gommers, Sayed Adel, Stéfan van der Walt, and Matti Picus who did much of the work in the main development branch.

The highlights of this release are:

  • Python 3.12.0 support.
  • Cython 3.0.0 compatibility.
  • Use of the Meson build system
  • Updated SIMD support
  • f2py fixes, meson and bind(x) support
  • Support for the updated Accelerate BLAS/LAPACK library

The Python versions supported in this release are 3.9-3.12.

New Features

Array API v2022.12 support in numpy.array_api

numpy.array_api now full supports the v2022.12 version of the array API standard. Note that this does not yet include the optional fft extension in the standard.

(gh-23789)

Support for the updated Accelerate BLAS/LAPACK library

Support for the updated Accelerate BLAS/LAPACK library, including ILP64 (64-bit integer) support, in macOS 13.3 has been added. This brings arm64 support, and significant performance improvements of up to 10x for commonly used linear algebra operations. When Accelerate is selected at build time, the 13.3+ version will automatically be used if available.

(gh-24053)

meson backend for f2py

f2py in compile mode (i.e. f2py -c) now accepts the

... (truncated)

Commits
  • d35cd07 Merge pull request #24722 from charris/prepare-1.26.0-release
  • 2f7c195 REL: Prepare for the NumPy 1.26.0 release
  • c550abf Merge pull request #24718 from rgommers/doc-update
  • 4893b24 DEV: improve spin docs command
  • 44fe37c DOC: fix two cross-references to SciPy docs in "building from source"
  • f2121dc DOC: Fix doc build warning for random.
  • ca97802 Merge pull request #24707 from charris/backport-24705
  • 92aab8c TYP: Use collections.abc.Buffer in the npt.ArrayLike definition
  • 56e580d TYP: Use collections.abc.Buffer in the Array API
  • 5ef53c6 TYP: Add annotations for the py3.12 buffer protocol
  • Additional commits viewable in compare view

Updates jupyterlab from 3.6.5 to 4.0.7

Release notes

Sourced from jupyterlab's releases.

v4.0.7

4.0.7

(Full Changelog)

Enhancements made

Bugs fixed

Maintenance and upkeep improvements

Documentation improvements

Contributors to this release

(GitHub contributors page for this release)

@​bollwyvl | @​fcollonval | @​github-actions | @​HaudinFlorence | @​jtpio | @​jupyterlab-probot | @​krassowski | @​lumberbot-app | @​meeseeksmachine | @​parmentelat | @​welcome

... (truncated)

Changelog

Sourced from jupyterlab's changelog.

(changelog)=

JupyterLab Changelog

v4.1

4.1.0 - Highlights

Moved plugins

Some internal JupyterLab plugins have been re-organized to allow for better flexibility for deployments and downstream applications like Notebook 7. This might affect users that disable specific plugins with the jupyter labextension disable command or the disabledExtensions config option.

  • The help:open command is not defined in the @jupyterlab/help-extension:resources plugin anymore, but has been moved to a new @jupyterlab/help-extension:open plugin instead.

v4.0

4.0.0 - Highlights

Below are the major highlights in JupyterLab 4.0.0.

New text editor

CodeMirror, the text editor used for cells and file editors, has been updated to CodeMirror 6. This brings important accessibility and performance improvements as well as better customization capabilities. We have also improved the editor settings. Previously, users had to customize settings separately for each type of cell, the file editor, and the console editor. Now, you can change your settings in one place. It is now easier to use the default settings for all editors and to change some settings for specific cases. For example, you can now hide line numbers only for markdown cells.

Developers can now provide editor extensions, like themes and programming language parsers, through new application registries.

New extension manager

Starting with JupyterLab 3, extensions can be installed via Python packages (or other providers of prebuilt extensions).

In JupyterLab 4, building on this feature, the Extension Manager now includes extensions from pypi.org. This removes the build step from installation of extension when using Extension Manager.

Developers can provide an alternative package repository to display their own set of extensions.

Improved document search

The Search and Replace functionality has been improved with new features when searching in a notebook:

  • Highlight matches in rendered markdown cells
  • Search in selection
  • Multi-line search
  • Replace using regex capture-group references
  • Replace while preserving case

... (truncated)

Commits

Updates jupyter-server from 1.24.0 to 2.7.3

Release notes

Sourced from jupyter-server's releases.

v2.7.3

2.7.3

(Full Changelog)

New features added

Contributors to this release

(GitHub contributors page for this release)

@​davidbrochart

v2.7.2

v2.7.1

2.7.1

(Full Changelog)

Bugs fixed

Maintenance and upkeep improvements

Documentation improvements

Contributors to this release

(GitHub contributors page for this release)

... (truncated)

Changelog

Sourced from jupyter-server's changelog.

2.7.3

(Full Changelog)

New features added

Contributors to this release

(GitHub contributors page for this release)

@​davidbrochart

2.7.1

(Full Changelog)

Bugs fixed

Maintenance and upkeep improvements

Documentation improvements

Contributors to this release

(GitHub contributors page for this release)

@​allstrive | @​bhperry | @​blink1073 | @​emmanuel-ferdman | @​Hind-M | @​kevin-bates | @​krassowski | @​mathbunnyru | @​matthewwiese | @​minrk | @​pre-commit-ci | @​welcome | @​wqj97 | @​Zsailer

2.7.0

(Full Changelog)

Bugs fixed

... (truncated)

Commits

Updates pytest-cov to 4.1.0

Changelog

Sourced from pytest-cov's changelog.

4.1.0 (2023-05-24)

  • Updated CI with new Pythons and dependencies.
  • Removed rsyncdir support. This makes pytest-cov compatible with xdist 3.0. Contributed by Sorin Sbarnea in [#558](https://github.com/pytest-dev/pytest-cov/issues/558) <https://github.com/pytest-dev/pytest-cov/pull/558>_.
  • Optimized summary generation to not be performed if no reporting is active (for example, when --cov-report='' is used without --cov-fail-under). Contributed by Jonathan Stewmon in [#589](https://github.com/pytest-dev/pytest-cov/issues/589) <https://github.com/pytest-dev/pytest-cov/pull/589>_.
  • Added support for JSON reporting. Contributed by Matthew Gamble in [#582](https://github.com/pytest-dev/pytest-cov/issues/582) <https://github.com/pytest-dev/pytest-cov/pull/582>_.
  • Refactored code to use f-strings. Contributed by Mark Mayo in [#572](https://github.com/pytest-dev/pytest-cov/issues/572) <https://github.com/pytest-dev/pytest-cov/pull/572>_.
  • Fixed a skip in the test suite for some old xdist. Contributed by a bunch of people in [#565](https://github.com/pytest-dev/pytest-cov/issues/565) <https://github.com/pytest-dev/pytest-cov/pull/565>_.

4.0.0 (2022-09-28)

Note that this release drops support for multiprocessing.

  • --cov-fail-under no longer causes pytest --collect-only to fail Contributed by Zac Hatfield-Dodds in [#511](https://github.com/pytest-dev/pytest-cov/issues/511) <https://github.com/pytest-dev/pytest-cov/pull/511>_.

  • Dropped support for multiprocessing (mostly because issue 82408 <https://github.com/python/cpython/issues/82408>_). This feature was mostly working but very broken in certain scenarios and made the test suite very flaky and slow.

    There is builtin multiprocessing support in coverage and you can migrate to that. All you need is this in your .coveragerc::

    [run] concurrency = multiprocessing parallel = true sigterm = true

  • Fixed deprecation in setup.py by trying to import setuptools before distutils. Contributed by Ben Greiner in [#545](https://github.com/pytest-dev/pytest-cov/issues/545) <https://github.com/pytest-dev/pytest-cov/pull/545>_.

  • Removed undesirable new lines that were displayed while reporting was disabled. Contributed by Delgan in [#540](https://github.com/pytest-dev/pytest-cov/issues/540) <https://github.com/pytest-dev/pytest-cov/pull/540>_.

  • Documentation fixes. Contributed by Andre Brisco in [#543](https://github.com/pytest-dev/pytest-cov/issues/543) <https://github.com/pytest-dev/pytest-cov/pull/543>_ and Colin O'Dell in [#525](https://github.com/pytest-dev/pytest-cov/issues/525) <https://github.com/pytest-dev/pytest-cov/pull/525>_.

  • Added support for LCOV output format via --cov-report=lcov. Only works with coverage 6.3+. Contributed by Christian Fetzer in [#536](https://github.com/pytest-dev/pytest-cov/issues/536) <https://github.com/pytest-dev/pytest-cov/issues/536>_.

  • Modernized pytest hook implementation. Contributed by Bruno Oliveira in [#549](https://github.com/pytest-dev/pytest-cov/issues/549) <https://github.com/pytest-dev/pytest-cov/pull/549>_ and Ronny Pfannschmidt in [#550](https://github.com/pytest-dev/pytest-cov/issues/550) <https://github.com/pytest-dev/pytest-cov/pull/550>_.

3.0.0 (2021-10-04)

... (truncated)

Commits
  • 2c9f217 Bump version: 4.0.0 → 4.1.0
  • 4d245df Update changelog and authors.
  • 7b095c8 Skip starting from xdist 3.0.2 (where boxed was removed).
  • 605d690 disabling boxed test if version xdist newer than 2.5.0
  • 76fb2a6 introduced f-strings
  • 0d63ede Update test config. Reapply some of the changes from PR567 to the right file ...
  • f3d8d83 Add support for JSON reporter
  • dec02ab Update test deps.
  • 88a7d34 chore: update AUTHORS and CHANGELOG
  • 74eb4cc perf: only call summary when the report will be used
  • Additional commits viewable in compare view

Updates pytest-mock to 3.11.1

Release notes

Sourced from pytest-mock's releases.

v3.11.1

  • Fixed introspection for failed assert_has_calls (#365).

  • Updated type annotations for mocker.patch and mocker.spy (#364).

Changelog

Sourced from pytest-mock's changelog.

3.11.1 (2023-06-15)

(This release source code is identical to 3.11.0 except a small internal fix to deployment/CI)

  • Fixed introspection for failed assert_has_calls ([#365](https://github.com/pytest-dev/pytest-mock/issues/365)_).

  • Updated type annotations for mocker.patch and mocker.spy ([#364](https://github.com/pytest-dev/pytest-mock/issues/364)_).

.. _#365: pytest-dev/pytest-mock#365 .. _#364: pytest-dev/pytest-mock#364

3.11.0 (2023-06-15)

  • Fixed introspection for failed assert_has_calls ([#365](https://github.com/pytest-dev/pytest-mock/issues/365)_).

  • Updated type annotations for mocker.patch and mocker.spy ([#364](https://github.com/pytest-dev/pytest-mock/issues/364)_).

.. _#365: pytest-dev/pytest-mock#365 .. _#364: pytest-dev/pytest-mock#364

3.10.0 (2022-10-05)

  • Added new mocker.stop(m) method to stop specific mocker.patch or mocker.spy calls ([#319](https://github.com/pytest-dev/pytest-mock/issues/319)_).

.. _#319: pytest-dev/pytest-mock#319

3.9.0 (2022-09-28)

  • Expose NonCallableMagicMock via the mocker fixture ([#318](https://github.com/pytest-dev/pytest-mock/issues/318)_).

.. _#318: pytest-dev/pytest-mock#318

3.8.2 (2022-07-05)

  • Fixed AsyncMock support for Python 3.7+ in mocker.async_stub ([#302](https://github.com/pytest-dev/pytest-mock/issues/302)_).

.. _#302: pytest-dev/pytest-mock#302

3.8.1 (2022-06-24)

  • Fixed regression caused by an explicit mock dependency in the code ([#298](https://github.com/pytest-dev/pytest-mock/issues/298)_).

.. _#298: pytest-dev/pytest-mock#298

... (truncated)

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deps: bump the major-dependencies group with 7 updates
080d0f2 
Updates the requirements on [arcgis](https://developers.arcgis.com/python/), [sqlalchemy](https://github.com/sqlalchemy/sqlalchemy), [numpy](https://github.com/numpy/numpy), [jupyterlab](https://github.com/jupyterlab/jupyterlab), [jupyter-server](https://github.com/jupyter-server/jupyter_server), [pytest-cov](https://github.com/pytest-dev/pytest-cov) and [pytest-mock](https://github.com/pytest-dev/pytest-mock) to permit the latest version.

Updates `arcgis` to 2.2.0

Updates `sqlalchemy` to 2.0.21
- [Release notes](https://github.com/sqlalchemy/sqlalchemy/releases)
- [Changelog](https://github.com/sqlalchemy/sqlalchemy/blob/main/CHANGES.rst)
- [Commits](https://github.com/sqlalchemy/sqlalchemy/commits)

Updates `numpy` to 1.26.0
- [Release notes](https://github.com/numpy/numpy/releases)
- [Changelog](https://github.com/numpy/numpy/blob/main/doc/RELEASE_WALKTHROUGH.rst)
- [Commits](numpy/numpy@v0.2.0...v1.26.0)

Updates `jupyterlab` from 3.6.5 to 4.0.7
- [Release notes](https://github.com/jupyterlab/jupyterlab/releases)
- [Changelog](https://github.com/jupyterlab/jupyterlab/blob/main/CHANGELOG.md)
- [Commits](https://github.com/jupyterlab/jupyterlab/compare/@jupyterlab/[email protected]...@jupyterlab/[email protected])

Updates `jupyter-server` from 1.24.0 to 2.7.3
- [Release notes](https://github.com/jupyter-server/jupyter_server/releases)
- [Changelog](https://github.com/jupyter-server/jupyter_server/blob/main/CHANGELOG.md)
- [Commits](jupyter-server/jupyter_server@v1.24.0...v2.7.3)

Updates `pytest-cov` to 4.1.0
- [Changelog](https://github.com/pytest-dev/pytest-cov/blob/master/CHANGELOG.rst)
- [Commits](pytest-dev/pytest-cov@v4.0.0...v4.1.0)

Updates `pytest-mock` to 3.11.1
- [Release notes](https://github.com/pytest-dev/pytest-mock/releases)
- [Changelog](https://github.com/pytest-dev/pytest-mock/blob/main/CHANGELOG.rst)
- [Commits](pytest-dev/pytest-mock@v3.10.0...v3.11.1)

---
updated-dependencies:
- dependency-name: arcgis
  dependency-type: direct:production
  dependency-group: major-dependencies
- dependency-name: sqlalchemy
  dependency-type: direct:production
  dependency-group: major-dependencies
- dependency-name: numpy
  dependency-type: direct:production
  dependency-group: major-dependencies
- dependency-name: jupyterlab
  dependency-type: direct:development
  update-type: version-update:semver-major
  dependency-group: major-dependencies
- dependency-name: jupyter-server
  dependency-type: direct:development
  update-type: version-update:semver-major
  dependency-group: major-dependencies
- dependency-name: pytest-cov
  dependency-type: direct:development
  dependency-group: major-dependencies
- dependency-name: pytest-mock
  dependency-type: direct:development
  dependency-group: major-dependencies
...

Signed-off-by: dependabot[bot] <[email protected]>
@dependabot dependabot bot added dependencies Pull requests that update a dependency file python Pull requests that update Python code labels Oct 12, 2023
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dependabot bot commented on behalf of github Oct 16, 2023

Looks like these dependencies are updatable in another way, so this is no longer needed.

@dependabot dependabot bot closed this Oct 16, 2023
@dependabot dependabot bot deleted the dependabot/pip/major-dependencies-607353e074 branch October 16, 2023 15:41
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