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Merge pull request #138 from mooreryan/update-readme
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Add note about building vignettes
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svteichman authored Sep 25, 2023
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Expand Up @@ -31,6 +31,15 @@ remotes::install_github("adw96/DivNet")
library(DivNet)
```

### Building Vignettes

By default, `remotes::install_github` will not build the included vignettes. If you would like to view the vignettes locally, install the packages using the following commands:

```r
remotes::install_github("adw96/breakaway", build_vignettes = TRUE)
remotes::install_github("adw96/DivNet", build_vignettes = TRUE)
```

## Basic Usage

Let’s analyse the Lee *et al.* dataset using DivNet. We could analyse at the ASV level, but to keep things simple let’s analyse the phylum level diversity.
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