1.2
Features
Support snv and indel spikein to long noisy reads (ONT, PacBio) using minimap2 aligner
Support arbitrarily long insertions, deletions, and inversions
Support translocations in all possible orientations
Obey user input SV breakends exactly if possible, add option (--require_exact
) to enforce this
Option to adjust noise around SV breakpoints
Miscellaneous / Bugfixes
Remove useless fraction-of-contig syntax from DEL type
Improvements to indels in noisy reads