v0.9.8

Wytamma · May 11, 2023 · 75d0daa · 75d0daa
1 parent 1c70cb8
commit 75d0daa
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diff --git a/DESCRIPTION b/DESCRIPTION
@@ -1,7 +1,7 @@
 Package: GISAIDR
 Type: Package
 Title: R wrapper for GISAID "API"
-Version: 0.9.7
+Version: 0.9.8
 Author: Wytamma Wirth
 Maintainer: Wytamma Wirth <[email protected]>
 Description: programmatically interact with the GISAID database query.

diff --git a/R/query.R b/R/query.R
@@ -22,7 +22,7 @@
 #' @param collection_date_complete include only entries with complete in collection date the results.
 #' @param total returns the total number of sequences matching the query.
 #' @param fast returns all of the accession_ids that match the query.
-#' @param aa_substitution_ceid returns all sequences with the selected amino acid mutation 
+#' @param aa_substitution_ceid returns all sequences with the selected amino acid mutation
 #' @param nucl_mutation_ceid returns all sequences with the selected nucleotide mutation
 #' @return data.frame
 query <-
@@ -78,6 +78,8 @@ query <-
           nucl_mutation = nucl_mutation
         ))
       }
+      results <- results[!duplicated(results$accession_id), ] # Remove duplicate entries
+      rownames(results) <- NULL # reset index
       return(results)
     } else if (total | load_all | fast) {
       return(