Snitkin-Lab-Umich
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- NG-probe Public
A Snakemake pipeline for culture-free Neisseria gonorrhoeae genome reconstruction and detection of putative resistance determinants from probe-based genomic sequencing.
Snitkin-Lab-Umich/NG-probe’s past year of commit activity - cauris_persvade_sv Public
A snakemake pipeline for quickly running PerSVade's structural variant calling on C auris samples
Snitkin-Lab-Umich/cauris_persvade_sv’s past year of commit activity - cauris_panaroo Public
Simple scripts for converting the output of QCD pipelines to be compatible with Panaroo and Orthofinder
Snitkin-Lab-Umich/cauris_panaroo’s past year of commit activity - Nanosake Public Forked from alipirani88/Nanosake
A Snakemake workflow to basecall, quality control and assemble Nanopore data.
Snitkin-Lab-Umich/Nanosake’s past year of commit activity
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