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Sanofi-Public

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  1. CodonBERT CodonBERT Public

    Repository for mRNA Paper and CodonBERT publication.

    Python 133 23

  2. enact-pipeline enact-pipeline Public

    Repository for ENACT pipeline for end-to-end analysis of Visium HD data

    Python 56 16

  3. RiboNN RiboNN Public

    RiboNN: predicting translation efficiencies from mRNA sequences

    Python 30 7

  4. spatialone-pipeline spatialone-pipeline Public

    Spatial One

    Python 28 4

  5. risk.assessr risk.assessr Public

    Define quality variables for evaluating the risk associated with R packages.

    R 28 2

  6. LMR-SurfaceID LMR-SurfaceID Public

    Repo contains source code of the SurfaceID paper

    Python 24 4

Repositories

Showing 10 of 43 repositories
  • SNAC-DB Public

    Repository containing pipelines developed for the SNAC-DB (Structural NANOBODY® VHH and Antibody Complex Database). SNAC-DB is ML-ready curation of the Protein Data Bank (PDB) for NANOBODY® VHH and antibody complex structures.

    Sanofi-Public/SNAC-DB’s past year of commit activity
    Python 5 0 0 0 Updated Jul 31, 2025
  • Clinical-BERT-Explainability Public

    To explain clinical BERT model predictions, we present an approach which leverages integrated gradients to attribute events in medical records that lead to an outcome prediction.

    Sanofi-Public/Clinical-BERT-Explainability’s past year of commit activity
    Python 10 1 0 0 Updated Jul 30, 2025
  • risk.assessr Public

    Define quality variables for evaluating the risk associated with R packages.

    Sanofi-Public/risk.assessr’s past year of commit activity
    R 28 GPL-2.0 2 1 0 Updated Jul 28, 2025
  • prodigyprotein Public

    Protein Diversification and Generation through Yielded mutations (Prodigy) Protein is an end-to-end platform for plug and play protein engineering

    Sanofi-Public/prodigyprotein’s past year of commit activity
    Python 1 0 0 0 Updated Jul 27, 2025
  • CImpact Public

    Causal inference library for timeseries analysis

    Sanofi-Public/CImpact’s past year of commit activity
    Python 15 1 0 1 Updated Jul 23, 2025
  • MIPHEI-ViT Public

    MIPHEI-ViT: Repository to train Image-to-Image H&E to Immunofluorescence models

    Sanofi-Public/MIPHEI-ViT’s past year of commit activity
    Jupyter Notebook 16 3 1 0 Updated Jul 17, 2025
  • RiboNN Public

    RiboNN: predicting translation efficiencies from mRNA sequences

    Sanofi-Public/RiboNN’s past year of commit activity
    Python 30 7 0 0 Updated Jul 8, 2025
  • RetroDMTA Public

    Code for the paper "Back to the Future of Lead Optimization: Benchmarking Compound Prioritization Strategies"

    Sanofi-Public/RetroDMTA’s past year of commit activity
    Python 0 0 0 0 Updated Jul 4, 2025
  • Sanofi-Public/Clinical-BERT-Training’s past year of commit activity
    Python 2 0 0 0 Updated Jul 3, 2025
  • causal_survival_analysis Public

    Causal survival analysis

    Sanofi-Public/causal_survival_analysis’s past year of commit activity
    R 1 GPL-3.0 0 0 0 Updated Jun 26, 2025

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