A Python tool to download and parse GenBank files

Installation

1. Fork git repo into local machine (click on fork) and clone, or simply clone main branch with

git clone https://github.com/Robaina/GenBankpy.git

2. CD to project directory and set conda environment if not already set:

conda env create -n genbankpy -f environment.yml

3. Activate environment:

conda activate genbankpy

Usage

You can find a jupyter notebook with usage examples here.

Citation

If you use this software, please cite it as below:

Robaina-Estévez, S. (2022). Genbankpy: a Python tool to ddownload and parse GenBank files (Version 0.0.1)[Computer software]. https://doi.org/10.5281/zenodo.7046036.