Merge pull request #592 from PrincetonUniversity/hotfix/remove-travis-ci

Remove Travis CI YAML and badge from README

README.md

@@ -5,7 +5,6 @@ athena
 <!-- [![Jenkins Build Status](https://jenkins.princeton.edu/buildStatus/icon?job=athena/PrincetonUniversity_athena_jenkins_master)](https://jenkins.princeton.edu/job/athena/job/PrincetonUniversity_athena_jenkins_master/) -->
 [![Project Status: Active – The project has reached a stable, usable state and is being actively developed.](https://www.repostatus.org/badges/latest/active.svg)](https://www.repostatus.org/#active)
 [![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.4455880.svg)](https://doi.org/10.5281/zenodo.4455880) <!-- v21.0, not Concept DOI that tracks the "latest" version (erroneously sorted by DOI creation date on Zenodo). 10.5281/zenodo.4455879 -->
-[![Travis CI Build Status](https://travis-ci.com/PrincetonUniversity/athena.svg?token=Ejzw3yndG1Fqub679gCB&branch=master)](https://travis-ci.com/PrincetonUniversity/athena)
 [![codecov](https://codecov.io/gh/PrincetonUniversity/athena/branch/master/graph/badge.svg?token=ZzniY084kP)](https://codecov.io/gh/PrincetonUniversity/athena)
 [![License](https://img.shields.io/badge/License-BSD%203--Clause-blue.svg)](https://opensource.org/licenses/BSD-3-Clause)
 [![Contributor Covenant](https://img.shields.io/badge/Contributor%20Covenant-2.0-4baaaa.svg)](code_of_conduct.md)

tst/ci/travis/install_fftw.sh → tst/ci/container/install_fftw.sh

@@ -4,7 +4,7 @@
 # FFTW 3.3.7 = released 2017-10-29
 version_str=3.3.8
 # for macOS builds, install FFTW from Homebrew
-if [ "$TRAVIS_OS_NAME" == "osx" ]; then
+if [ "$OS_NAME" == "osx" ]; then
     export HOMEBREW_NO_AUTO_UPDATE=1
     cd fftw
     brew link fftw || true
@@ -13,7 +13,7 @@ if [ "$TRAVIS_OS_NAME" == "osx" ]; then
 	echo "Using cached FFTW"
     else
         echo "Installing FFTW with Homebrew"
-	HOMEBREW_TEMP=$TRAVIS_BUILD_DIR/fftw
+	HOMEBREW_TEMP=$BUILD_DIR/fftw
 	# brew update
         brew install fftw
 	brew unlink fftw
@@ -37,7 +37,7 @@ else
 	cd fftw-${version_str}
 	echo "Configuring and building FFTW"
 	# --enable-mpi: not needed, since Plimpton's FFT library is used in Athena++ for MPI+FFT grav
-	./configure --prefix=$TRAVIS_BUILD_DIR/fftw &> fftw.configure
+	./configure --prefix=$BUILD_DIR/fftw &> fftw.configure
 	# make -j4 &> fftw.make
 	make &> fftw.make
 	make install &> fftw.install

tst/ci/travis/install_hdf5.sh → tst/ci/container/install_hdf5.sh

@@ -6,7 +6,7 @@
 # HDF5 1.10.1 = released 2018-08-22
 version_str=1.10.4
 # for macOS builds, install HDF5 from Homebrew
-if [ "$TRAVIS_OS_NAME" == "osx" ]; then
+if [ "$OS_NAME" == "osx" ]; then
     export HOMEBREW_NO_AUTO_UPDATE=1
     cd hdf5
     # HDF5 dependencies
@@ -18,7 +18,7 @@ if [ "$TRAVIS_OS_NAME" == "osx" ]; then
 	echo "Using cached HDF5"
     else
         echo "Installing HDF5 with Homebrew"
-	HOMEBREW_TEMP=$TRAVIS_BUILD_DIR/hdf5
+	HOMEBREW_TEMP=$BUILD_DIR/hdf5
 	# brew update
         brew install hdf5 # --with-mpi
 	brew unlink hdf5
@@ -41,7 +41,7 @@ else
 	tar zxf hdf5-${version_str}.tar.gz
 	cd hdf5-${version_str}
 	echo "Configuring and building HDF5"
-	./configure --prefix=$TRAVIS_BUILD_DIR/hdf5 &> hdf5.configure
+	./configure --prefix=$BUILD_DIR/hdf5 &> hdf5.configure
 	# For parallel MPI build of HDF5 library:
 	# CC=/Users/kfelker/mpich-install/bin/mpicc ./configure --enable-parallel
 	make -j4 &> hdf5.make

tst/ci/travis/install_mpich.sh → tst/ci/container/install_mpich.sh

@@ -3,7 +3,7 @@
 # MPICH 3.2.1 = released 2017-11-10
 version_str=3.2.1
 # for macOS builds, install MPICH from Homebrew
-if [ "$TRAVIS_OS_NAME" == "osx" ]; then
+if [ "$OS_NAME" == "osx" ]; then
     export HOMEBREW_NO_AUTO_UPDATE=1
     cd mpich
     brew unlink open-mpi || true
@@ -21,7 +21,7 @@ if [ "$TRAVIS_OS_NAME" == "osx" ]; then
 	echo "Using cached MPICH"
     else
         echo "Installing MPICH with Homebrew"
-	HOMEBREW_TEMP=$TRAVIS_BUILD_DIR/mpich
+	HOMEBREW_TEMP=$BUILD_DIR/mpich
 	# There is no libtoolize in macOS system. Homebrew uses "g" prefix
 	ln -s `which glibtoolize`  /usr/local/opt/libtool/bin/libtoolize
 	brew install mpich # --HEAD

tst/ci/travis/install_openmpi.sh → tst/ci/container/install_openmpi.sh

@@ -4,7 +4,7 @@
 # will need to manually adjust below URL after major version 3.0
 version_str=3.0.2
 # for macOS builds, install OpenMPI from Homebrew:
-if [ "$TRAVIS_OS_NAME" == "osx" ]; then
+if [ "$OS_NAME" == "osx" ]; then
     export HOMEBREW_NO_AUTO_UPDATE=1
     cd openmpi
     brew unlink mpich || true
@@ -23,7 +23,7 @@ if [ "$TRAVIS_OS_NAME" == "osx" ]; then
 	echo "Using cached OpenMPI"
     else
         echo "Installing OpenMPI with Homebrew"
-	HOMEBREW_TEMP=$TRAVIS_BUILD_DIR/openmpi
+	HOMEBREW_TEMP=$BUILD_DIR/openmpi
 	# brew update
         brew install open-mpi #--cc=gcc-7 --build-from-source --without-fortran
 	brew unlink open-mpi
@@ -48,7 +48,7 @@ else
 	cd openmpi-${version_str}
 	echo "Configuring and building OpenMPI"
 	# The configure output is not printed to the Travis CI log due to the redirect
-	./configure --prefix=$TRAVIS_BUILD_DIR/openmpi &> openmpi.configure # CC=$C_COMPILER CXX=$CXX_COMPILER --without-fortran
+	./configure --prefix=$BUILD_DIR/openmpi &> openmpi.configure # CC=$C_COMPILER CXX=$CXX_COMPILER --without-fortran
 	make -j4 &> openmpi.make
 	make install &> openmpi.install
 	cd ..

tst/ci/travis/run_tests_travis.sh → tst/ci/container/run_tests_container.sh

@@ -1,22 +1,27 @@
 #!/bin/bash
 
+# Script originally used for testing on Travis CI osx and Ubuntu containers;
+# could be modified to be useful for Docker, Apptainer, etc. containers for testing
+OS_NAME=osx   #linux, ubuntu
+BUILD_DIR=$HOME/build
+
 # Terminate script at first cmd w/ non-zero exit status & echo commands before executing (-v) as lines are read
 set -ev # -x # for tracing/debugging commands after variable expansion
 # Do not use "python run_tests.py" to run all tests, so that:
-# - Each set/directory of tests are timed separately (although entire script is timed as one unit in Travis CI)
+# - Each set/directory of tests are timed separately
 # - Script fails after first broken set of tests
 # (Could alternatively group sets of tests with && operator)
 
 # Assume script is called from the top-level athena/ directory
 cd tst/regression/
 
 if [ "$MPI_CHOICE" == "openmpi" ]; then
-    PATH=$TRAVIS_BUILD_DIR/openmpi/bin/:$PATH
+    PATH=$BUILD_DIR/openmpi/bin/:$PATH
     MPI_OPTS=--oversubscribe
     # Disable OpenMPI 3.1 vader CMA due to namespace permission issues on Travis CI / Docker containers
     export OMPI_MCA_btl_vader_single_copy_mechanism=none
 else
-    PATH=$TRAVIS_BUILD_DIR/mpich/bin/:$PATH
+    PATH=$BUILD_DIR/mpich/bin/:$PATH
 fi
 
 # --silent option refers only to stdout of Makefile calls for condensed build logs. Don't use with pgen_compile.py
@@ -25,17 +30,18 @@ time python3 run_tests.py pgen/pgen_compile --config=--cxx=$TEMP_CXX -c=--ccmd=$
 time python3 run_tests.py pgen/hdf5_reader_serial --config=--cxx=$TEMP_CXX -c=--ccmd=$TEMP_CCMD -v
 
 # need to switch serial compiler to Homebrew's GCC instead of /usr/bin/gcc -> Apple Clang for OpenMP functionality
-if [ "$TRAVIS_OS_NAME" == "osx" ]; then
+if [ "$OS_NAME" == "osx" ]; then
     time python3 run_tests.py mpi --config=--cxx=$TEMP_CXX -c=--ccmd=$TEMP_CCMD --mpirun_opts=$MPI_OPTS --silent
-    # TODO(felker): improve selection of 'gcc-9' so when 'brew install gcc' formula instead installs gcc-10, this won't break
-    export OMPI_CC=/usr/local/bin/gcc-9
-    export OMPI_CXX=/usr/local/bin/g++-9
-    export MPICH_CC=/usr/local/bin/gcc-9
-    export MPICH_CXX=/usr/local/bin/g++-9
-    time python3 run_tests.py hybrid --config=--cxx=g++ --config=--ccmd=/usr/local/bin/g++-9 \
+    # TODO(felker): improve selection of 'gcc-14' so when 'brew install gcc' formula instead installs gcc-10, this won't break
+    # TODO(felker): note, these hardcoded paths were only true for x86_64 macOS systems; arm64 uses /opt/homebrew/bin/gcc-14
+    export OMPI_CC=/usr/local/bin/gcc-14
+    export OMPI_CXX=/usr/local/bin/g++-14
+    export MPICH_CC=/usr/local/bin/gcc-14
+    export MPICH_CXX=/usr/local/bin/g++-14
+    time python3 run_tests.py hybrid --config=--cxx=g++ --config=--ccmd=/usr/local/bin/g++-14 \
 	 --config=--mpiccmd='mpicxx -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX' --mpirun_opts=$MPI_OPTS --silent
-    time python3 run_tests.py omp --config=--cxx=g++ --config=--ccmd=/usr/local/bin/g++-9 --silent
-    time python3 run_tests.py grav --config=--cxx=g++ --config=--ccmd=/usr/local/bin/g++-9 \
+    time python3 run_tests.py omp --config=--cxx=g++ --config=--ccmd=/usr/local/bin/g++-14 --silent
+    time python3 run_tests.py grav --config=--cxx=g++ --config=--ccmd=/usr/local/bin/g++-14 \
 	 --config=--mpiccmd='mpicxx -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX' --mpirun_opts=$MPI_OPTS --silent # requires FFTW library
 else
     export OMPI_CC=$TEMP_CCMD