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python code for mapping copy numbers to genes #334

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alexandriai168 opened this issue Mar 19, 2025 · 0 comments
Open

python code for mapping copy numbers to genes #334

alexandriai168 opened this issue Mar 19, 2025 · 0 comments
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using Ruby's R code, create code in python that does the same thing

ruby's code: https://github.com/PNNL-CompBio/coderdata/blob/bladder_pdo/build/bladderpdo/CNV-segfile-annotation.R

GenomicRanges in pypi: https://pypi.org/project/GenomicRanges/

homo.sapiens in conda: https://anaconda.org/bioconda/bioconductor-homo.sapiens
@alexandriai168 alexandriai168 self-assigned this Mar 19, 2025
@alexandriai168 alexandriai168 added the enhancement New feature or request label Apr 2, 2025
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