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NCI60 transcriptomics, proteomics, mutations, cnvs contain genes not in <code>genes.csv</code>

Status: Open.

#405 In PNNL-CompBio/coderdata;

· ymahlich opened on Jun 18, 2025

Update documentation page to provide package information

documentationImprovements or additions to documentationImprovements or additions to documentation

Status: Open.

#402 In PNNL-CompBio/coderdata;

· sgosline opened on Jun 16, 2025

 ·  

v2.2 Package Update

Updating usage.md

documentationImprovements or additions to documentationImprovements or additions to documentation

Status: Open.

#401 In PNNL-CompBio/coderdata;

· mg-andrews opened on Jun 12, 2025

 ·  

v2.2 Package Update

collapse MPNST datasets, move to end of build process

Status: Open.

#400 In PNNL-CompBio/coderdata;

· sgosline opened on Jun 11, 2025

 ·  

v2.2

Update MPNST dataset model type

data update

Status: Open.

#399 In PNNL-CompBio/coderdata;

· jjacobson95 opened on Jun 11, 2025

 ·  

v2.2

HCMI and CPTAC Transcriptomics need to be re-evaluated

bugSomething isn't workingSomething isn't working

data update

Status: Open.

Bug

#397 In PNNL-CompBio/coderdata;

· jjacobson95 opened on Jun 6, 2025

 ·  

v2.2

DepMap Transcriptomics Values are not scaled correctly.

bugSomething isn't workingSomething isn't working

data update

Status: Open.

Bug

#396 In PNNL-CompBio/coderdata;

· jjacobson95 opened on Jun 6, 2025

 ·  

v2.2

Clarify Organoid across all Datasets

data update

Status: Open.

#395 In PNNL-CompBio/coderdata;

· jjacobson95 opened on Jun 6, 2025

 ·  

v2.2

Add latest MPNST Data from Synapse

data update

Status: Open.

#394 In PNNL-CompBio/coderdata;

· jjacobson95 opened on Jun 6, 2025

Some HCMI Samples are missing cancer type

data update

Status: Open.

#393 In PNNL-CompBio/coderdata;

· jjacobson95 opened on Jun 6, 2025

 ·  

v2.2

Missing Cancer types in PancPDO Data - Is this intentional?

bugSomething isn't workingSomething isn't working

data update

questionFurther information is requestedFurther information is requested

Status: Open.

#392 In PNNL-CompBio/coderdata;

· jjacobson95 opened on Jun 6, 2025

CoderData Package needs Checksum for Download Function

bugSomething isn't workingSomething isn't working

package

Status: Open.

#391 In PNNL-CompBio/coderdata;

· jjacobson95 opened on Jun 6, 2025

 ·  

v2.2