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beataml mutations follow different format than mutations from Broad/Sanger #315

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ymahlich opened this issue Jan 30, 2025 · 1 comment · Fixed by #380
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beataml mutations follow different format than mutations from Broad/Sanger #315

ymahlich opened this issue Jan 30, 2025 · 1 comment · Fixed by #380
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@jjacobson95
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@ymahlich
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Mutation description in the BeatAML dataset follow a slightly different format than mutation records that are originating from Broad/Sanger. (See attached screenshot).

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@sgosline
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Fix should be to pull the Ensemble transcript id (split at the colon) and then it should agree.

@jjacobson95 jjacobson95 mentioned this issue May 1, 2025
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Aligned mutation style with other datasets PNNL-CompBio/coderdata
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@sgosline @ymahlich @jjacobson95