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Calculate velocities for trajectories

Status: Open.

#2470 In OpenChemistry/avogadrolibs;

· ghutchis opened on Dec 3, 2025

Plugins with pixi run should use --as-is

Status: Open.

#2469 In OpenChemistry/avogadrolibs;

· ghutchis opened on Dec 3, 2025

Avogadro MOL / SD file should support multiple coordinate sets / trajectories

Status: Open.

#2462 In OpenChemistry/avogadrolibs;

· ghutchis opened on Nov 30, 2025

Avogadro crashes when uploading a PDB file

file-formatrelevant to IO file formatsrelevant to IO file formats

Status: Open.

#2456 In OpenChemistry/avogadrolibs;

· a-cheminfo opened on Nov 28, 2025

If the opacity of a surface is less than max, the surface colours are darkend

rendering

Status: Open.

#2451 In OpenChemistry/avogadrolibs;

· FredrikBarna opened on Nov 28, 2025

Avogadro reads incorrect geometry from .cif file

file-formatrelevant to IO file formatsrelevant to IO file formats

Status: Open.

#2437 In OpenChemistry/avogadrolibs;

· FredrikBarna opened on Nov 21, 2025

where to find nanotube structure in avogadro software

Status: Open.

#2430 In OpenChemistry/avogadrolibs;

· PS20022 opened on Nov 18, 2025

Zoom in / out broken when opening a structure directly from the command line

Status: Open.

#2416 In OpenChemistry/avogadrolibs;

· codecollider opened on Nov 14, 2025

Mouse clicks and atoms in 3D view sometimes misaligned

bug

Status: Open.

#2405 In OpenChemistry/avogadrolibs;

· matterhorn103 opened on Nov 12, 2025

Openbabel conformer search thows errors "does not match numbers of atoms"

Status: Open.

#2402 In OpenChemistry/avogadrolibs;

· lenhanpham opened on Nov 11, 2025

"Freeze selected atoms" does not work with OpenBabel "Optimize Geometry"

enhancementfeature changes / API changesfeature changes / API changes

Status: Open.

#2401 In OpenChemistry/avogadrolibs;

· lenhanpham opened on Nov 11, 2025

find_package(AvogadroLibs) fails because JKQTPlotter6::JKQTPlotter6 isn't found

build

Status: Open.

#2397 In OpenChemistry/avogadrolibs;

· yurivict opened on Nov 10, 2025