update book for reproducible schedule

materials/_quarto.yml

@@ -3,8 +3,8 @@ project:
   output-dir: _book
 
 book: 
-  title: "Fundamentals in Data Management for Qualitative and Quantitative Arctic Research"
-  subtitle: "January 27-31, 2025"
+  title: "Reproducible Approaches to Arctic Research Using R"
+  subtitle: "February 24-28, 2025"
   reader-mode: false
 
   # NoteHD: cover image is not working
@@ -28,24 +28,20 @@ book:
 
   chapters:
     - index.qmd # preface 
-    - session_01.qmd # ADC intro
-    - session_02.qmd # R Setup 
-    - session_03.qmd # Intro to R programming
-    - session_04.qmd # Thinking preferencees + Social aspects of collab
-    - session_05.qmd # DMP
-    - session_06.qmd # Literate analysis
-    - session_07.qmd # ADC-Fundamental practice 1 
-    - session_08.qmd # Data Modeling and Tidy Data
-    - session_09.qmd # Cleaning and Wrangling
-    - session_10.qmd # Intro Data Viz
-    - session_11.qmd # Ethical Data Collection
-    - session_12.qmd # ADC-Fundamentals practice 2
-    - session_13.qmd # Text data
-    - session_14.qmd # Census data
-    - session_15.qmd # Metadata best practices & publishing
-    - session_16.qmd # Data portals
-    - session_17.qmd # Survey Workflows
-    - session_18.qmd # Repro and Provenance
+    - session_01.qmd # ADC intro and R Setup
+    - session_02.qmd # Quarto
+    - session_03.qmd # DMP and Data Submission
+    - session_04.qmd # git intro
+    - session_05.qmd # Data Modeling
+    - session_06.qmd # Dplyr
+    - session_07.qmd # git collaboration
+    - session_08.qmd # Publishing analysis and data viz
+    - session_09.qmd # Practice I
+    - session_10.qmd # Functions and packages
+    - session_11.qmd # Thinking preferences and FAIR/CARE
+    - session_12.qmd # Practice II and portals
+    - session_13.qmd # Geospatial
+    - session_14.qmd # reproducible papers
 
 
 bibliography: book.bib

materials/session_01.qmd

@@ -1,9 +1,11 @@
 ---
-title: "Introduction to the Arctic Data Center"
+title: "Introduction to the Arctic Data Center and RStudio Server Setup"
 title-block-banner: true
 format:
   html:
     code-overflow: wrap
 ---
 
 {{< include /sections/adc-intro-to-policies.qmd >}}
+
+{{< include /sections/rstudio-server-setup.qmd >}}

materials/session_02.qmd

@@ -1,9 +1,9 @@
 ---
-title: "RStudio Server Setup"
+title: "Introduction to Quarto"
 title-block-banner: true
 
 ---
 
 
-{{< include /sections/rstudio-server-setup.qmd >}}
+{{< include /sections/r-intro-quarto.qmd >}}
 

materials/session_03.qmd

@@ -1,8 +1,10 @@
 ---
-title: "Introduction to R Programming"
+title: "Data Management Plans & Submitting to the Arctic Data Center"
 title-block-banner: true
 execute: 
   eval: true
 ---
 
-{{< include /sections/intro-r-programming.qmd >}}
+{{< include /sections/data-management-plans-reduced.qmd >}}
+
+{{< include /sections/metadata-adc-data-documentation-hands-on.qmd >}}

materials/session_04.qmd

@@ -1,5 +1,5 @@
 ---
-title: "Thinking Preferences & Social Aspects of Collaboration"
+title: "Introduction to git and GitHub"
 title-block-banner: true
 execute: 
   eval: false
@@ -14,7 +14,7 @@ format:
 
 
 
-{{< include /sections/collaboration-thinking-preferences.qmd >}}
+{{< include /sections/git-github-intro.qmd >}}
+
 
 
-{{< include /sections/collaboration-social-data-policies.qmd >}}

materials/session_05.qmd

@@ -1,6 +1,6 @@
 ---
-title: "Writing Data Management Plans"
+title: "Data Modeling Essentials"
 title-block-banner: true
 ---
 
-{{< include /sections/data-management-plans-reduced.qmd >}}
+{{< include /sections/data-modeling.Rmd >}}

materials/session_06.qmd

@@ -1,6 +1,6 @@
 ---
-title: "Literate Analysis with Quarto"
+title: "Cleaning and Wrangling Data"
 title-block-banner: true
 ---
 
-{{< include /sections/r-intro-quarto.qmd >}}
+{{< include /sections/data-cleaning-manipulation-tidyverse.Rmd >}}

materials/session_07.qmd

@@ -1,8 +1,8 @@
 ---
-title: "R Practice: Literate Analysis "
+title: "Collaborating with git and GitHub"
 title-block-banner: true
 execute:
-  eval: false
+  eval: true
 # format:
 #   html: 
 #     code-link: true
@@ -11,4 +11,4 @@ execute:
 #     code-overflow: wrap
 ---
 
-{{< include /sections/exercise-intro-programming-socialsci.qmd >}}
+{{< include /sections/git-collab-merge-conflicts.qmd >}}

materials/session_08.qmd

@@ -1,10 +1,12 @@
 ---
-title: "Data Modeling / Tidy Data"
+title: "Publishing Analysis to the Web and Data Visualization"
 title-block-banner: true
 format:
   html:
     code-overflow: wrap
     code-link: true
 ---
 
-{{< include /sections/data-modeling-socialsci.qmd >}}
+{{< include /sections/git-github-publishing-analysis.qmd >}}
+
+{{< include /sections/visualization-ggplot-leaflet.qmd >}}

materials/session_09.qmd

@@ -1,5 +1,5 @@
 ---
-title: "Cleaning and Wrangling Data"
+title: "Practice Session I"
 title-block-banner: true
 execute:
   eval: false
@@ -11,4 +11,4 @@ format:
     code-overflow: wrap
 ---
 
-{{< include /sections/clean-wrangle-data.qmd >}}
+{{< include /sections/r-practice-clean-wrangle-visualize.qmd >}}

materials/session_10.qmd

@@ -1,9 +1,11 @@
 ---
-title: "Intro to Data Visualization"
+title: "Writing Functions and Packages"
 title-block-banner: true
 format:
   html:
     code-overflow: wrap
 ---
 
-{{< include /sections/visualization-ggplot-leaflet.qmd >}}
+{{< include /sections/r-creating-functions.qmd >}}
+
+{{< include /sections/r-creating-packages.qmd >}}

materials/session_11.qmd

@@ -1,6 +1,8 @@
 ---
-title: "Ethical Data Collection"
+title: "Thinking Preferences and Ethical Data Collection"
 title-block-banner: true
 ---
 
+{{< include /sections/collaboration-thinking-preferences-short.qmd >}}
+
 {{< include /sections/data-ethics-eloka-2023.qmd >}}

materials/session_12.qmd

@@ -1,8 +1,10 @@
 ---
-title: "R Practice: Cleaning and Wrangling"
+title: "R Practice II and Data Portals"
 title-block-banner: true
 execute:
   eval: false
 ---
 
-{{< include /sections/exercise-tidyverse-socialsci.qmd >}}
+{{< include /sections/r-practice-function-cleaning-data.qmd >}}
+
+{{< include /sections/adc-creating-data-portals.qmd >}}

materials/session_13.qmd

@@ -1,5 +1,5 @@
 ---
-title: "Working with Text Data in R"
+title: "Working with Spatial Data"
 title-block-banner: true
 # execute:
 #   eval: false
@@ -11,4 +11,4 @@ title-block-banner: true
 #     code-overflow: wrap
 ---
 
-{{< include /sections/intro-tidy-text-data.qmd >}}
+{{< include /sections/geospatial-vector-analysis.qmd >}}

materials/session_14.qmd

@@ -1,6 +1,6 @@
 ---
-title: "U.S Census Data in R"
+title: "Reproducibility and Provenance"
 title-block-banner: true
 ---
 
-{{< include /sections/census-data.qmd >}}
+{{< provenance-reproducibility-datapaper.qmd >}}