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@janash
janash committed Jul 2, 2024
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61 changes: 24 additions & 37 deletions _sources/chapters/binding_site_investigation.ipynb
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10 changes: 5 additions & 5 deletions chapters/Creating_Plots_in_Jupyter_Notebooks.html
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<li class="toctree-l1"><a class="reference internal" href="EC_class_ligands_search.html">Enzyme Commission Class with Ligands</a></li>
<li class="toctree-l1"><a class="reference internal" href="binding_site_investigation.html">Investigation the Binding Site</a></li>
<li class="toctree-l1"><a class="reference internal" href="binding_site_investigation.html">Visualizing the Binding Site of a Protein-Ligand Complex</a></li>
</ul>

</div>
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<div class="cell_output docutils container">
<div class="output text_plain highlight-myst-ansi notranslate"><div class="highlight"><pre><span></span>&lt;matplotlib.collections.PathCollection at 0x7f7ce4593f90&gt;
<div class="output text_plain highlight-myst-ansi notranslate"><div class="highlight"><pre><span></span>&lt;matplotlib.collections.PathCollection at 0x7f959f7e06d0&gt;
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<div class="output text_plain highlight-myst-ansi notranslate"><div class="highlight"><pre><span></span>[&lt;matplotlib.lines.Line2D at 0x7f7ce45a2bd0&gt;]
<div class="output text_plain highlight-myst-ansi notranslate"><div class="highlight"><pre><span></span>[&lt;matplotlib.lines.Line2D at 0x7f95d03e4390&gt;]
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<img alt="../_images/720b0e757eaaa9fb1a4f291e9abd2db1cede159aac7a370b4b02faa4ef0066e2.png" src="../_images/720b0e757eaaa9fb1a4f291e9abd2db1cede159aac7a370b4b02faa4ef0066e2.png" />
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<div class="output text_plain highlight-myst-ansi notranslate"><div class="highlight"><pre><span></span>&lt;Axes: xlabel=&#39;Protein Concentration (mg/mL)&#39;, ylabel=&#39;A595&#39;&gt;
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<div class="exercise admonition">
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<img alt="../_images/a951e6aad5e398bb17cba2a433ced6358be44b366ddd21b896699eebb23e7172.png" src="../_images/a951e6aad5e398bb17cba2a433ced6358be44b366ddd21b896699eebb23e7172.png" />
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6 changes: 3 additions & 3 deletions chapters/EC_class_ligands_search.html
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<script src="https://cdnjs.cloudflare.com/ajax/libs/require.js/2.3.4/require.min.js"></script>
<link rel="index" title="Index" href="../genindex.html" />
<link rel="search" title="Search" href="../search.html" />
<link rel="next" title="Investigation the Binding Site" href="binding_site_investigation.html" />
<link rel="next" title="Visualizing the Binding Site of a Protein-Ligand Complex" href="binding_site_investigation.html" />
<link rel="prev" title="Molecular Visualization with iCN3D" href="MolVis_with_iCN3D.html" />
<meta name="viewport" content="width=device-width, initial-scale=1"/>
<meta name="docsearch:language" content="en"/>
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<li class="toctree-l1 current active"><a class="current reference internal" href="#">Enzyme Commission Class with Ligands</a></li>
<li class="toctree-l1"><a class="reference internal" href="binding_site_investigation.html">Investigation the Binding Site</a></li>
<li class="toctree-l1"><a class="reference internal" href="binding_site_investigation.html">Visualizing the Binding Site of a Protein-Ligand Complex</a></li>
</ul>

</div>
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title="next page">
<div class="prev-next-info">
<p class="prev-next-subtitle">next</p>
<p class="prev-next-title">Investigation the Binding Site</p>
<p class="prev-next-title">Visualizing the Binding Site of a Protein-Ligand Complex</p>
</div>
<i class="fa-solid fa-angle-right"></i>
</a>
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2 changes: 1 addition & 1 deletion chapters/File_Parsing.html
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<li class="toctree-l1"><a class="reference internal" href="EC_class_ligands_search.html">Enzyme Commission Class with Ligands</a></li>
<li class="toctree-l1"><a class="reference internal" href="binding_site_investigation.html">Investigation the Binding Site</a></li>
<li class="toctree-l1"><a class="reference internal" href="binding_site_investigation.html">Visualizing the Binding Site of a Protein-Ligand Complex</a></li>
</ul>

</div>
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<li class="toctree-l1"><a class="reference internal" href="EC_class_ligands_search.html">Enzyme Commission Class with Ligands</a></li>
<li class="toctree-l1"><a class="reference internal" href="binding_site_investigation.html">Investigation the Binding Site</a></li>
<li class="toctree-l1"><a class="reference internal" href="binding_site_investigation.html">Visualizing the Binding Site of a Protein-Ligand Complex</a></li>
</ul>

</div>
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2 changes: 1 addition & 1 deletion chapters/Modifying_Ligands_with_rdkit.html
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<li class="toctree-l1"><a class="reference internal" href="EC_class_ligands_search.html">Enzyme Commission Class with Ligands</a></li>
<li class="toctree-l1"><a class="reference internal" href="binding_site_investigation.html">Investigation the Binding Site</a></li>
<li class="toctree-l1"><a class="reference internal" href="binding_site_investigation.html">Visualizing the Binding Site of a Protein-Ligand Complex</a></li>
</ul>

</div>
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