v0.3.0

What's Changed

Added

1. Added max-cpu-factor, max-mem-factor to the template snakemake-float.yaml file
2. Added directory permissions snippets to the cloud init. script

Deprecated

1. The cluster default for retries has been set to 0 now to make the retry behavior more transparent to the user.

PRs

• Fixed retires, efs/fsx permissions issue by @GallVp in #4

Full Changelog: v0.2.0...v0.3.0

v0.2.0

What's Changed

Added

1. Added parameters max-cpu-factor, max-mem-factor to match the user experience provided by nf-float
2. Added --customTag so that the jobs are bundled into a workflow on MM Cloud OpCentre
3. Added container-init-snakemake-fsx-efs.sh for container initialization on MM Cloud OpCentre

Fixed

1. Removed a match statement from float_utils.py to support Python 3.9
2. Fixed an issue where job memory was not correctly assigned if the pipeline specified mem_gb instead of mem_mib
3. Fixed an issue where job submission failed due to very low memory requirement compared to the number of required vCPUs
4. Fixed an issue where --conda-prefix was ignored and /memverge/.snakemake was force specified as the prefix

Deprecated

1. data-volumes is no longer a required parameter.

Dependencies

1. Snakemake==7
2. Python>=3.9

PRs

• Added max-cpu-factor, max-mem-factor and --customTag by @GallVp in #1

New Contributors

• @GallVp made their first contribution in #1

Full Changelog: v0.1.0...v0.2.0

v0.1.0

Full Changelog: https://github.com/MemVerge/snakemake-float/commits/v0.1.0