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@Medical-Image-Analysis-Laboratory

Medical Image Analysis Laboratory

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  1. mialsuperresolutiontoolkit mialsuperresolutiontoolkit Public

    The Medical Image Analysis Laboratory Super-Resolution ToolKit (MIALSRTK) consists of a set of C++ and Python processing and workflow tools necessary to perform motion-robust super-resolution fetal…

    C++ 26 12

  2. FetalSynthSeg FetalSynthSeg Public

    FetalSynthSeg Code

    Python 5

  3. FaBiAN FaBiAN Public

    FaBiAN is the first Fetal Brain magnetic resonance Acquisition Numerical phantom that simulates realistic T2-weighted magnetic resonance images of the developing fetal brain throughout gestation. I…

    MATLAB 4 5

  4. Perinatal_SR_Autoencoder Perinatal_SR_Autoencoder Public

    Network code for autoencoder training on dMRI pre-term newborns of the developing Human Connectome Project (dHCP)

    Python 4

  5. fetmrqc fetmrqc Public

    FetMRQC is a tool for quality assessment (QA) and quality control (QC) of T2-weighted (T2w) fetal brain MR images.

    Python 4

  6. fetal_brain_utils fetal_brain_utils Public

    Utilities for fetal brain reconstruction pipelines

    Python 3

Repositories

Showing 10 of 19 repositories
  • fetal_t2mapping Public
    Medical-Image-Analysis-Laboratory/fetal_t2mapping’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Oct 31, 2024
  • fabian_utils Public

    Python wrapper to run fabian

    Medical-Image-Analysis-Laboratory/fabian_utils’s past year of commit activity
    MATLAB 0 0 0 0 Updated Oct 30, 2024
  • fetal_brain_utils Public

    Utilities for fetal brain reconstruction pipelines

    Medical-Image-Analysis-Laboratory/fetal_brain_utils’s past year of commit activity
    Python 3 0 0 0 Updated Aug 15, 2024
  • fetmrqc Public

    FetMRQC is a tool for quality assessment (QA) and quality control (QC) of T2-weighted (T2w) fetal brain MR images.

    Medical-Image-Analysis-Laboratory/fetmrqc’s past year of commit activity
    Python 4 Apache-2.0 0 5 0 Updated Aug 12, 2024
  • FetalSynthSeg Public

    FetalSynthSeg Code

    Medical-Image-Analysis-Laboratory/FetalSynthSeg’s past year of commit activity
    Python 5 0 0 0 Updated Jul 23, 2024
  • interpret-lesion-unc Public Forked from NataliiaMolch/interpret-lesion-unc

    Multiple sclerosis cortical lesion segmentation model on MP2RAGE - DE and MCDP uncertainty quantification - Lesion-scale uncertainty - Instance-wise uncertainty - Interpretability of lesion-scale uncertainty - Interpretability of instance-wise uncertainty

    Medical-Image-Analysis-Laboratory/interpret-lesion-unc’s past year of commit activity
    Python 2 2 0 0 Updated Jul 9, 2024
  • Perinatal_fODF_DL_estimation Public
    Medical-Image-Analysis-Laboratory/Perinatal_fODF_DL_estimation’s past year of commit activity
    Python 3 0 0 0 Updated May 3, 2024
  • dl_fiber_domain_shift Public

    This repository contains the code for the paper "Cross-Age and Cross-Site Domain Shift Impacts on Deep Learning-Based White Matter Fiber Estimation in Newborn and Baby Brains" by Rizhong Lin, Ali Gholipour, Jean-Philippe Thiran, Davood Karimi, Hamza Kebiri, and Meritxell Bach Cuadra.

    Medical-Image-Analysis-Laboratory/dl_fiber_domain_shift’s past year of commit activity
    Python 0 MIT 0 0 0 Updated May 3, 2024
  • MS_WML_uncs Public Forked from NataliiaMolch/MS_WML_uncs

    This repository contains the code used for the study of voxel- and lesion- scale uncertainty in application to white matter multiple sclerosis segmentation task.

    Medical-Image-Analysis-Laboratory/MS_WML_uncs’s past year of commit activity
    Python 1 2 0 0 Updated Apr 30, 2024
  • FaBiAN Public

    FaBiAN is the first Fetal Brain magnetic resonance Acquisition Numerical phantom that simulates realistic T2-weighted magnetic resonance images of the developing fetal brain throughout gestation. It is open source and supports reproducibility studies to improve fetal brain diagnosis.

    Medical-Image-Analysis-Laboratory/FaBiAN’s past year of commit activity
    MATLAB 4 BSD-3-Clause 5 1 1 Updated Nov 22, 2023
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