Merge pull request #181 from MannLabs/bump_to_160

#174: bump version to 1.6.0
MannLabs · May 28, 2024 · f3388fd · f3388fd
2 parents 62d7c17 + 1ad81e0
commit f3388fd
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Showing 13 changed files with 15 additions and 15 deletions.
diff --git a/README.md b/README.md
@@ -1,4 +1,4 @@
-![Release](https://img.shields.io/badge/release-v1.5.5-brightgreen)
+![Release](https://img.shields.io/badge/release-v1.6.0-brightgreen)
 ![License](https://img.shields.io/badge/License-Apache-brightgreen)
 ![Tests](https://github.com/MannLabs/alphadia/workflows/Default%20installation%20and%20tests/badge.svg)
 ![Deployment](https://github.com/MannLabs/alphadia/workflows/Publish%20on%20PyPi%20and%20release%20on%20GitHub/badge.svg)

diff --git a/alphadia/__init__.py b/alphadia/__init__.py
@@ -1,3 +1,3 @@
 #!python
 
-__version__ = "1.5.5"
+__version__ = "1.6.0"
diff --git a/docs/index.md b/docs/index.md
@@ -1,6 +1,6 @@
 
 # AlphaDIA Documentation
-**Version:** 1.5.5 | [Github](https://github.com/MannLabs/alphadia)
+**Version:** 1.6.0 | [Github](https://github.com/MannLabs/alphadia)
 
 Open-source DIA search engine built with the alphaX ecosystem. Built with [alpharaw](https://github.com/MannLabs/alpharaw) and [alphatims](https://github.com/MannLabs/alphatims) for raw file acces. Spectral libraries are predicted with [peptdeep](https://github.com/MannLabs/alphapeptdeep) and managed by [alphabase](https://github.com/MannLabs/alphabase). Quantification is powered by [directLFQ](https://github.com/MannLabs/directLFQ).
 

diff --git a/gui/package.json b/gui/package.json
@@ -1,7 +1,7 @@
 {
  "name": "alphadia",
  "productName": "alphadia-gui",
- "version": "1.5.5",
+ "version": "1.6.0",
  "description": "Graphical user interface for DIA data analysis",
  "main": "dist/electron.js",
  "homepage": "./",

diff --git a/gui/src/main/modules/profile.js b/gui/src/main/modules/profile.js
@@ -7,7 +7,7 @@ const { dialog } = require('electron')
 const Profile = class {
 
  config = {
- "version": "1.5.5",
+ "version": "1.6.0",
  "conda": {
  "envName": "alpha",
  "path": ""

diff --git a/misc/.bumpversion.cfg b/misc/.bumpversion.cfg
@@ -1,5 +1,5 @@
 [bumpversion]
-current_version = 1.5.5
+current_version = 1.6.0
 commit = True
 tag = True
 parse = (?P<major>\d+)\.(?P<minor>\d+)\.(?P<patch>\d+)(\-(?P<release>[a-z]+)(?P<build>\d+))?

diff --git a/release/macos/build_backend_macos.sh b/release/macos/build_backend_macos.sh
@@ -6,7 +6,7 @@ python -c "from huggingface_hub import get_full_repo_name; print('success')"
 
 pip install build
 python -m build
-pip install "dist/alphadia-1.5.5-py3-none-any.whl"
+pip install "dist/alphadia-1.6.0-py3-none-any.whl"
 
 # Creating the stand-alone pyinstaller folder
 pip install pyinstaller

diff --git a/release/macos/build_pkg_macos.sh b/release/macos/build_pkg_macos.sh
@@ -2,7 +2,7 @@
 
 # Set up package name and version
 PACKAGE_NAME="alphadia"
-PACKAGE_VERSION="1.5.5"
+PACKAGE_VERSION="1.6.0"
 
 ARCH=$(uname -m)
 if [ "$ARCH" == "x86_64" ]; then

diff --git a/release/macos/build_zip_macos.sh b/release/macos/build_zip_macos.sh
@@ -2,7 +2,7 @@
 
 # Set up package name and version
 PACKAGE_NAME="alphadia"
-PACKAGE_VERSION="1.5.5"
+PACKAGE_VERSION="1.6.0"
 
 ARCH=$(uname -m)
 if [ "$ARCH" == "x86_64" ]; then

diff --git a/release/macos/distribution.xml b/release/macos/distribution.xml
@@ -1,6 +1,6 @@
 <?xml version="1.0" encoding="utf-8" standalone="no"?>
 <installer-script minSpecVersion="1.000000">
- <title>alphaDIA 1.5.5</title>
+ <title>alphaDIA 1.6.0</title>
  <background mime-type="image/png" file="alphadia.png" scaling="proportional"/>
  <welcome file="welcome.html" mime-type="text/html" />
  <conclusion file="conclusion.html" mime-type="text/html" />

diff --git a/release/macos/info.plist b/release/macos/info.plist
@@ -9,9 +9,9 @@
  <key>CFBundleIconFile</key>
  <string>alphadia.icns</string>
  <key>CFBundleIdentifier</key>
- <string>alphadia.1.5.5</string>
+ <string>alphadia.1.6.0</string>
  <key>CFBundleShortVersionString</key>
- <string>1.5.5</string>
+ <string>1.6.0</string>
  <key>CFBundleInfoDictionaryVersion</key>
  <string>6.0</string>
  <key>CFBundleName</key>

diff --git a/release/windows/alphadia_innoinstaller.iss b/release/windows/alphadia_innoinstaller.iss
@@ -2,7 +2,7 @@
 ; SEE THE DOCUMENTATION FOR DETAILS ON CREATING INNO SETUP SCRIPT FILES!
 
 #define MyAppName "AlphaDIA"
-#define MyAppVersion "1.5.5"
+#define MyAppVersion "1.6.0"
 #define MyAppPublisher "Max Planck Institute of Biochemistry, Mann Labs"
 #define MyAppURL "https://github.com/MannLabs/alphadia"
 #define MyAppExeName "alphadia-gui.exe"
@@ -25,7 +25,7 @@ LicenseFile=..\..\LICENSE.txt
 PrivilegesRequired=lowest
 PrivilegesRequiredOverridesAllowed=dialog
 OutputDir=..\..\dist
-OutputBaseFilename=alphadia-1.5.5-win-x64
+OutputBaseFilename=alphadia-1.6.0-win-x64
 SetupIconFile=..\logos\alphadia.ico
 Compression=lzma
 SolidCompression=yes

diff --git a/release/windows/build_backend.ps1 b/release/windows/build_backend.ps1
@@ -6,7 +6,7 @@ python -c 'from huggingface_hub import get_full_repo_name; print("success")'
 
 pip install build
 python -m build
-pip install "dist/alphadia-1.5.5-py3-none-any.whl"
+pip install "dist/alphadia-1.6.0-py3-none-any.whl"
 
 # Creating the stand-alone pyinstaller folder
 pip install pyinstaller tbb