Customise filter by nFeature_RNA threshold #54
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Merge branch 'add_reports' of github.com:susansjy22/HPCell into add_reports # Conflicts: # tests/testthat/test_single_functions.R
Merge branch 'master' of github.com:susansjy22/HPCell Conflicts: inst/rmd/Empty_droplet_report.Rmd
Merge branch 'master' of github.com:susansjy22/HPCell # Conflicts: # R/execute_pipeline.R # inst/rmd/Technical_variation_report.Rmd # inst/rmd/pseudobulk_analysis_report.Rmd
Merge branch 'master' of github.com:susansjy22/HPCell # Conflicts: # NAMESPACE # R/execute_pipeline.R # R/functions.R # README.rmd # inst/rmd/Empty_droplet_report.Rmd # inst/rmd/Technical_variation_report.Rmd # inst/rmd/pseudobulk_analysis_report.Rmd # man/get_unique_tissues.Rd # tests/testthat/test_single_functions.R
Merge remote-tracking branch 'upstream/master' Conflicts: R/execute_pipeline.R R/functions.R R/utilities.R
Merge branch 'master' of github.com:susansjy22/HPCell # Conflicts: # R/functions.R # README.rmd # tests/testthat/test_single_functions.R
Merge branch 'master' of github.com:susansjy22/HPCell Conflicts: DESCRIPTION R/utilities.R README.rmd
Merge branch 'add_reports' of github.com:susansjy22/HPCell into add_reports Conflicts: DESCRIPTION tests/testthat/test_single_functions.R
Merge branch 'master' into add_reports Conflicts: man/test_differential_abundance_hpc.Rd tests/testthat/test_single_functions.R
Merge branch 'master' of github.com:susansjy22/HPCell # Conflicts: # DESCRIPTION
Merge branch 'master' into add_reports # Conflicts: # README.rmd
Merge branch 'master' of github.com:susansjy22/HPCell # Conflicts: # R/utilities.R
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Solve issue #50
The second request
lower = 100remains unchanged, which has been addressed in the code alreadyR/utilities.R#L76