feat: issue #4: added simple slurm job script which runs the conversi…

…on serially
MRC-CBU · Apr 25, 2024 · 46568d5 · 46568d5
1 parent 5d60849
commit 46568d5
Showing 1 changed file with 14 additions and 0 deletions.
diff --git a/MEG/slurm_meg_bids_conversion_job_script.sh b/MEG/slurm_meg_bids_conversion_job_script.sh
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+#!/bin/tcsh
+#SBATCH --nodes 1-1
+#SBATCH --ntasks 1
+#SBATCH --cpus-per-task 1
+#SBATCH --time 1:0:00
+
+# setup conda environment
+conda activate /imaging/local/software/mne_python/mne1.6.1_0
+
+# navigate to the project root
+cd /path/to/your/project/root
+
+# run the meg bids conversion pipeline
+python meg_bids_conversion.py