Skip to content

Commit

Permalink
fix: lints
Browse files Browse the repository at this point in the history
  • Loading branch information
tfwulff committed May 28, 2024
1 parent f92b39c commit 62269d9
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions workflow/rules/common.smk
Original file line number Diff line number Diff line change
Expand Up @@ -14,7 +14,7 @@ def list_reference_genomes():
paths = SAMPLEINFO["reference"].unique()
genomes = {}
for path in paths:
ident = ".".join(path.split("/")[-1].split(".")[:-1])
ident = ".".join(path.split('/')[-1].split(".")[:-1])
if not ident in genomes.keys():
genomes[ident] = path
return genomes
Expand Down Expand Up @@ -53,7 +53,7 @@ def download_model_for_clair3(wildcards):
}
return (
path2model[config["basecalling_model"]],
path2model[config["basecalling_model"]].split("/")[-1].split(".tar.gz")[0],
path2model[config["basecalling_model"]].split('/')[-1].split(".tar.gz")[0],
)


Expand Down

0 comments on commit 62269d9

Please sign in to comment.