update requirements

requirements.txt

@@ -1,12 +1,12 @@
 wheel~=0.36.2
-setuptools~=52.0.0
-numpy~=1.20.0
+setuptools~=56.0.0
+numpy~=1.20.2
 jsonschema~=3.2.0
-pandas~=1.2.1
-networkx~=2.5
-lxml~=4.6.2
+pandas~=1.2.3
+networkx~=2.5.1
+lxml~=4.6.3
 requests~=2.25.1
-iso8601~=0.1.13
+iso8601~=0.1.14
 chardet~=4.0.0
 jinja2~=2.11.3
 beautifulsoup4~=4.9.3
@@ -15,16 +15,16 @@ mzml2isa==1.0.3
 #-e git+http://github.com/ISA-tools/isa-api@4e38b09abac60c6acb787169e6eaeac0ac35c1ae#egg=isatools
 biopython~=1.78
 progressbar2~=3.53.1
-deepdiff~=5.2.2
+deepdiff~=5.2.3
 PyYAML~=5.4.1
-bokeh~=2.2.3
+bokeh~=2.3.1
 # test dependencies
 # tox==3.14.0
 # nose==1.3.7
 certifi==2020.12.5
-flake8==3.8.4
-ddt==1.4.1
+flake8==3.9.0
+ddt==1.4.2
 behave==1.2.6
 httpretty==1.0.5
 sure==1.4.11
-coveralls~=3.0.0
+coveralls~=3.0.1

setup.py

@@ -13,7 +13,7 @@ def read(f_name):
 
 setup(
  name='isatools',
- version='0.12.0',
+ version='0.12.1',
  packages=['isatools',
  'isatools.convert',
  'isatools.create',
@@ -60,20 +60,20 @@ def read(f_name):
  'Programming Language :: Python :: 3.9',
  ],
  install_requires=[
- 'numpy~=1.20.0',
+ 'numpy~=1.20.2',
  'jsonschema~=3.2.0',
- 'pandas~=1.2.1',
- 'networkx~=2.5',
- 'lxml~=4.6.1',
- 'requests~=2.25',
+ 'pandas~=1.2.3',
+ 'networkx~=2.6',
+ 'lxml~=4.6.3',
+ 'requests~=2.25.1',
  'chardet~=4.0.0',
- 'iso8601~=0.1.13',
+ 'iso8601~=0.1.14',
  'jinja2~=2.11.3',
  'beautifulsoup4~=4.9.3',
  'mzml2isa==1.0.3',
  'biopython~=1.78',
  'progressbar2~=3.53.1',
- 'deepdiff~=5.2.2',
+ 'deepdiff~=5.2.3',
  'PyYAML~=5.4.1'
  ],
  test_suite='tests'