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Added enzymatic tissue dissociation fields #1599

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@arschat arschat commented Dec 20, 2024

#1592

Release notes

For dissociation_protocol.json schema:

  • rename reagents friendly name to distinguish with digestion_solution
  • add digestion_time
  • add digesion_time_units
  • add digestion_temperature
  • add digestion_solution

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  • Need 5 Reviewers to approve because this is a update

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@ESapenaVentura ESapenaVentura left a comment

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Minor comments and a change to the regex, otherwise LGTM!

},
"digestion_temperature": {
"description": "Temperature of digestion in Celsius or in general terms (i.e. cold, warm, room temperature).",
"pattern": "\\d+(\\.\\d+)?|frozen|cold|room temperature|warm",
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Pattern must be anchored (And it should be grouped in order to properly capture alternative groups):

Suggested change
"pattern": "\\d+(\\.\\d+)?|frozen|cold|room temperature|warm",
"pattern": "^(\\d+(\\.\\d+)?|frozen|cold|room temperature|warm)$",

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Otherwise, things like "11frozen", "frozencold" will be accepted https://regex101.com/r/iRzCpr/1

@@ -1 +1,6 @@
Schema,Change type,Change message,Version,Date
type/protocol/biomaterial_collection/dissociation_protocol,minor,Changed of user_friendly name of reagent field,,
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Suggested change
type/protocol/biomaterial_collection/dissociation_protocol,minor,Changed of user_friendly name of reagent field,,
type/protocol/biomaterial_collection/dissociation_protocol,minor,Changed user_friendly name of reagent field,,

very very minor correction :)

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2 participants