Add index files (#304)

* Copy sample files for upload to extras * Add index files to test branch * Do not delete branch publish files only add
HDFGroup · Jul 19, 2024 · d6a6026 · d6a6026
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diff --git a/.github/workflows/publish-branch.yml b/.github/workflows/publish-branch.yml
@@ -36,5 +36,5 @@ jobs:
 
         - name: Sync dir to S3 bucket
           run: |
-                aws s3 sync ./HDFVIEW s3://${{ secrets.AWS_S3_BUCKET }}/${{ vars.TARGET_PATH }}/${{ inputs.target_dir }} --delete
+                aws s3 sync ./HDFVIEW s3://${{ secrets.AWS_S3_BUCKET }}/${{ vars.TARGET_PATH }}/${{ inputs.target_dir }}
 
diff --git a/HDFVIEW/extras/samples/index.html b/HDFVIEW/extras/samples/index.html
@@ -0,0 +1,13 @@
+<html><body>
+<ul>
+<li><a href='./Roy.nc'>./Roy.nc</a></li>
+<li><a href='./annras.hdf'>./annras.hdf</a></li>
+<li><a href='./apollo17_earth.jpg'>./apollo17_earth.jpg</a></li>
+<li><a href='./data40x10.txt'>./data40x10.txt</a></li>
+<li><a href='./hdf5_test.h5'>./hdf5_test.h5</a></li>
+<li><a href='./hdf5_test.h5.ddl'>./hdf5_test.h5.ddl</a></li>
+<li><a href='./misr_am1_metadata.hdf'>./misr_am1_metadata.hdf</a></li>
+<li><a href='./swp05569slg.fits'>./swp05569slg.fits</a></li>
+<li><a href='./tst0001.fits'>./tst0001.fits</a></li>
+</ul>
+</body></html>
diff --git a/HDFVIEW/index.html b/HDFVIEW/index.html
@@ -0,0 +1,11 @@
+<html><body>
+<hr />
+<p>HDFView is a graphic utility designed for viewing and editing the
+contents of HDF4 and HDF5 files.</p>
+<p>This location provides the following:</p>
+<hr />
+<ul>
+<li><a href='./samples/index.html'>samples</a> -- Sample hdf4 and hdf5 files</li>
+<li><a href='./v3_3/index.html'>v3_3</a> -- Version 3.3 releases based on HDF5-1.14.* versions and HDF-4.2+ versions</li>
+</ul>
+</body></html>
diff --git a/HDFVIEW/v3_3/index.html b/HDFVIEW/v3_3/index.html
@@ -0,0 +1,13 @@
+<html><body>
+<hr />
+<p>HDFView Version 3.3.* is a graphic utility designed for viewing and editing the
+contents of HDF4 and HDF5 files. This version series was first released in April 2023, based on
+HDF-4.2.16 and HDF5-1.14.*.<br />
+<p>This location provides the following:</p>
+<hr />
+<ul>
+<li><a href='./v3_3_0/index.html'>HDFView 3_3_0</a> -- HDFView Version 3.3.0 released, HDF-4.2.16 and HDF5-1.14.0</li>
+<li><a href='./v3_3_1/index.html'>HDFView 3_3_1</a> -- HDFView Version 3.3.1 released, HDF-4.2.16 and HDF5-1.14.2</li>
+<li><a href='./v3_3_2/index.html'>HDFView 3_3_2</a> -- HDFView Version 3.3.2 released, HDF-4.3.0 and HDF5-1.14.4</li>
+</ul>
+</body></html>
diff --git a/HDFVIEW/v3_3/v3_3_0/RELEASE.txt b/HDFVIEW/v3_3/v3_3_0/RELEASE.txt
@@ -0,0 +1,105 @@
+The current HDFView products can be downloaded at:
+        https://www.hdfgroup.org/downloads/hdfview/
+
+
+HDF Libraries
+=============================================================================
+This release was built and tested with HDF 4.2.x and HDF5 1.14.x.
+
+Windows ONLY: HDFView built with VS 2015 will require that
+the Visual C++ Redistributable Packages be installed on your machine.
+If you cannot access HDF5 files then you do not have these packages.
+You can obtain them from:
+         https://www.microsoft.com/en-us/download/details.aspx?id=48145
+
+
+JDK
+=============================================================================
+This release was built and tested with OpenJDK 19. It uses modules and the
+newest jpackage for distribution.
+
+Major Enhancements
+==============================================================================
+    * This version supports the new references available in hdf5 1.12 releases.
+    * Support for reading a SWMR created file, using a configurable timer to 
+      refresh dataset tables.
+    * Refactored the attribute object classes to use the same object logic as
+      datasets. This allows data objects to display table views using the same
+      logic. This includes the editing and reference handling.
+
+Major Bug Fixes
+==============================================================================
+    * HDFVIEW-284 (crashes on NETCDF-4 grids) has been fixed. The problem was
+      that references in variable-length containers were trying to be handled
+      like strings. Upon investigation, the problem was found to extend to 
+      references in any container. The table display code for vlen references
+      also changed to account for the hdf5 Java API fixes.
+      The fix required that variable-length types in the Java wrappers in the
+      hdf5 library for read and write also be fixed.
+
+      HDFView-221 Add support for true Variable-length types in Java
+      Sub-issue HDFView-222 fixed the read/write support for variable-length
+      in the Java wrappers. This fix involved handling the data object as
+      a list of lists and using the datatype of the list.
+      Sub-issue HDFView-222 fixed the object library to handle the List of Lists
+      concept.
+      Sub-issue HDFView-223 updated the DataProviders, DataDisplayConverters
+      and DataValidators to work with variable-length List of Lists.
+
+    ***** Previous fixes *****
+    * HDFVIEW-197 (incorrectly displaying image data) has been fixed. The
+      problem was that the initial starting values for calculation of minimum
+      and maximum data values were invalid. In addition, an option to allow
+      dynamic data ranges has been added. 
+
+    * Added support to read and display non-standard floating point numbers.
+    * Added optional startDir to command line options.
+    * Corrected user.home vs user.dir confusion.
+    * Split Current Working Directory options into three selections:
+      a. Current Work Directory or user.dir system property
+      b. User Home Directory or user.home system property
+      c. User selected directory
+
+Minor Bug Fixes
+==============================================================================
+    * Corrected the create new attribute dialog from trying to write
+      the attribute twice.
+    * Added an initilize lib version bounds function. Now the change
+      lib version dialog correctly preloads the combo box values.
+    * Correct display of dimension for scalar types.
+
+
+Limitations / Known Problems
+==============================================================================
+    * HDFView currently cannot nicely handle large datasets when using the
+      default display mode, as the data is loaded in its entirety. To view
+      large datasets, it is recommended to right click on a data object and
+      use the "Open As" menu item, where a subset of data to view can be
+      selected.
+
+    * HDFView also cannot nicely handle large numbers of objects, because of
+      a design issue that requires HDFView to visit all the objects in a file.
+
+    * Object/region references can't be opened by a double-click or by
+      right-clicking and choosing "Show As Table/Image" when inside a compound
+      datatype.
+
+    * If a file is opened in read-only mode, right-clicking on a dataset in
+      in the tree view and choosing any of the options under the
+      "Export Dataset" menu item will fail with a message of
+      'Unable to export dataset: Unable to open file'. The current workaround
+      is to re-open the file in read/write mode.
+
+    * The 'Recent Files' button does not work on Mac due to a cross-platform
+      issue with SWT.
+
+    * Selecting and changing individual points in PaletteView for an image
+      palette is broken.
+
+    * Logging and optional HDF4 requires rebuilds from source.
+
+
+Other Notes
+==============================================================================
+
+
diff --git a/HDFVIEW/v3_3/v3_3_0/index.html b/HDFVIEW/v3_3/v3_3_0/index.html
@@ -0,0 +1,13 @@
+<html><body>
+<hr />
+<p>HDFView 3.3.0 is a graphic utility designed for viewing and editing the
+contents of HDF4 and HDF5 files. This version released in April 2023, based on
+HDF-4.2.16 and HDF5-1.14.0.<br />
+See the <a href='./RELEASE.txt'>Release Notes</a> for more information.</p>
+<p>This location provides the following:</p>
+<hr />
+<ul>
+<li><a href='./documentation/index.html'>documentation</a> -- HDFView 3.3.0 documentation including the UserGuide</li>
+<li><a href='./downloads/index.html'>downloads</a> -- Version 3.3.0 release files</li>
+</ul>
+</body></html>
diff --git a/HDFVIEW/v3_3/v3_3_1/RELEASE.txt b/HDFVIEW/v3_3/v3_3_1/RELEASE.txt
@@ -0,0 +1,96 @@
+The current HDFView products can be downloaded at:
+        https://www.hdfgroup.org/downloads/hdfview/
+
+
+HDF Libraries
+=============================================================================
+This release was built and tested with HDF 4.2.16 and HDF5 1.14.2.
+
+Windows ONLY: HDFView built with VS 2015 will require that
+the Visual C++ Redistributable Packages be installed on your machine.
+If you cannot access HDF5 files then you do not have these packages.
+You can obtain them from:
+         https://www.microsoft.com/en-us/download/details.aspx?id=48145
+
+
+JDK
+=============================================================================
+This release was built and tested with OpenJDK 19. It uses modules and the
+newest jpackage for distribution.
+
+Major Enhancements
+==============================================================================
+    * GH #121 Updated all icons with transpareancy
+
+Major Bug Fixes
+==============================================================================
+    * GH #119 (crashes opening HDF4 file) has been fixed. The problem was
+      that the HDF4 xdr.dll file was not copied from the hdf4 install location.
+
+    ***** Previous fixes *****
+    * HDFVIEW-284 (crashes on NETCDF-4 grids) has been fixed. The problem was
+      that references in variable-length containers were trying to be handled
+      like strings. Upon investigation, the problem was found to extend to 
+      references in any container. The table display code for vlen references
+      also changed to account for the hdf5 Java API fixes.
+      The fix required that variable-length types in the Java wrappers in the
+      hdf5 library for read and write also be fixed.
+
+      HDFView-221 Add support for true Variable-length types in Java
+      Sub-issue HDFView-222 fixed the read/write support for variable-length
+      in the Java wrappers. This fix involved handling the data object as
+      a list of lists and using the datatype of the list.
+      Sub-issue HDFView-222 fixed the object library to handle the List of Lists
+      concept.
+      Sub-issue HDFView-223 updated the DataProviders, DataDisplayConverters
+      and DataValidators to work with variable-length List of Lists.
+
+Minor Bug Fixes
+==============================================================================
+    * Corrected how the program updates changes to the fonts made in the User Preferences
+      dialog. There are still issues with having to trigger a visual refresh.
+
+    * GH #73 (Check aarch64 in machine.arch property) fixed by adding a section to
+      for aarch64.
+
+    * GH #147 (HDFView 3.3.0 shows incorrect references in compound types in datasets)
+      fixed by adding a start index into the object reference array of data read from a
+      compound type.
+
+Limitations / Known Problems
+==============================================================================
+    * HDFView currently cannot nicely handle large datasets when using the
+      default display mode, as the data is loaded in its entirety. To view
+      large datasets, it is recommended to right click on a data object and
+      use the "Open As" menu item, where a subset of data to view can be
+      selected.
+
+    * HDFView also cannot nicely handle large numbers of objects, because of
+      a design issue that requires HDFView to visit all the objects in a file.
+
+    * Object/region references can't be opened by a double-click or by
+      right-clicking and choosing "Show As Table/Image" when inside a compound
+      datatype.
+
+    * If a file is opened in read-only mode, right-clicking on a dataset in
+      in the tree view and choosing any of the options under the
+      "Export Dataset" menu item will fail with a message of
+      'Unable to export dataset: Unable to open file'. The current workaround
+      is to re-open the file in read/write mode.
+
+    * The 'Recent Files' button does not work on Mac due to a cross-platform
+      issue with SWT.
+
+    * Selecting and changing individual points in PaletteView for an image
+      palette is broken.
+
+    * Logging and optional HDF4 requires rebuilds from source.
+
+    * Automatically opening HDFView and displaying a file selected still does display
+    the file on a mac.
+
+
+Other Notes
+==============================================================================
+
+
diff --git a/HDFVIEW/v3_3/v3_3_1/index.html b/HDFVIEW/v3_3/v3_3_1/index.html
@@ -0,0 +1,13 @@
+<html><body>
+<hr />
+<p>HDFView 3.3.1 is a graphic utility designed for viewing and editing the
+contents of HDF4 and HDF5 files. This version released in September 2023, based on
+HDF-4.2.16 and HDF5-1.14.2.<br />
+See the <a href='./RELEASE.txt'>Release Notes</a> for more information.</p>
+<p>This location provides the following:</p>
+<hr />
+<ul>
+<li><a href='./documentation/index.html'>documentation</a> -- HDFView 3.3.1 documentation including the UserGuide</li>
+<li><a href='./downloads/index.html'>downloads</a> -- Version 3.3.1 release files</li>
+</ul>
+</body></html>
diff --git a/HDFVIEW/v3_3/v3_3_2/RELEASE.txt b/HDFVIEW/v3_3/v3_3_2/RELEASE.txt
@@ -0,0 +1,104 @@
+The current HDFView products can be downloaded at:
+        https://github.com/HDFGroup/hdfview/releases
+
+
+HDF Libraries
+=============================================================================
+This release was built and tested with HDF 4.3.x and HDF5 1.15.x.
+
+
+JDK
+=============================================================================
+This release was built and tested with OpenJDK 21. It uses modules, the
+newest jpackage for distribution and adds support for float16 datatypes.
+
+
+Major Enhancements
+==============================================================================
+    * GH #117 Add User Option for editing the plugin path and include plugins.
+    * GH #138 Add Support for operating with float16 datatypes.
+
+    ***** Previous fixes *****
+    * GH #121 Updated all icons with transparency.
+
+Major Bug Fixes
+==============================================================================
+    *
+
+    ***** Previous fixes *****
+    * GH #119 (crashes opening HDF4 file) has been fixed. The problem was
+      that the HDF4 xdr.dll file was not copied from the hdf4 install location.
+
+    * HDFVIEW-284 (crashes on NETCDF-4 grids) has been fixed. The problem was
+      that references in variable-length containers were handled like strings.
+      Upon investigation, the problem found was that references in any container
+      were handled like strings.
+        The table display code for vlen references  also changed to account for
+      the changes which fixed the hdf5 Java API. The fix required that
+      variable-length types in the Java wrappers in the
+      hdf5 library for read and write also be fixed.
+
+      HDFView-221 Add support for true Variable-length types in Java
+      Sub-issue HDFView-222 fixed the read/write support for variable-length
+      in the Java wrappers. This fix involved handling the data object as
+      a list of lists and using the datatype of the list.
+      Sub-issue HDFView-222 fixed the object library to handle the List of Lists
+      concept.
+      Sub-issue HDFView-223 updated the DataProviders, DataDisplayConverters
+      and DataValidators to work with variable-length List of Lists.
+
+
+Minor Bug Fixes
+==============================================================================
+    * GH #159 (Help menu dialogs have gigantic images) Implemented by changing the size from 1024 to 256.
+    * GH #171 (HDFView fails to find input files on command line when using relative paths)
+
+    ***** Previous fixes *****
+    * Corrected how the program updates changes to the fonts made in the User Preferences
+      dialog. There are still issues with having to trigger a visual refresh.
+
+    * GH #73 (Check aarch64 in machine.arch property) fixed by adding a section to
+      for aarch64.
+
+    * GH #147 (HDFView 3.3.0 shows incorrect references in compound types in datasets)
+      fixed by adding a start index into the object reference array of data read from a
+      compound type.
+
+
+Limitations / Known Problems
+==============================================================================
+    * HDFView currently cannot nicely handle large datasets when using the
+      default display mode, as the data is loaded in its entirety. To view
+      large datasets, it is recommended to right click on a data object and
+      use the "Open As" menu item, where a subset of data to view can be
+      selected.
+
+    * HDFView also cannot nicely handle large numbers of objects, because of
+      a design issue that requires HDFView to visit all the objects in a file.
+
+    * Object/region references can't be opened by a double-click or by
+      right-clicking and choosing "Show As Table/Image" when inside a compound
+      datatype.
+
+    * If a file is opened in read-only mode, right-clicking on a dataset in
+      in the tree view and choosing any of the options under the
+      "Export Dataset" menu item will fail with a message of
+      'Unable to export dataset: Unable to open file'. The current workaround
+      is to re-open the file in read/write mode.
+
+    * The 'Recent Files' button does not work on Mac due to a cross-platform
+      issue with SWT.
+
+    * Selecting and changing individual points in PaletteView for an image
+      palette is broken.
+
+    * Logging and optional HDF4 requires rebuilds from source.
+
+    * Automatically opening HDFView and displaying a file selected still does
+      not display the file on a mac.
+
+
+Other Notes
+==============================================================================
+
+
diff --git a/HDFVIEW/v3_3/v3_3_2/documentation/index.html b/HDFVIEW/v3_3/v3_3_2/documentation/index.html
@@ -0,0 +1,12 @@
+<html><body>
+<hr />
+<p>HDFView 3.3.2 is a graphic utility designed for viewing and editing the
+contents of HDF4 and HDF5 files. This version released in June 2024, based on
+HDF-4.3.0 and HDF5-1.14.4.<br />
+See the <a href='../RELEASE.txt'>Release Notes</a> for more information.</p>
+<p>This location provides the following documentation:</p>
+<hr />
+<ul>
+<li><a href='./UsersGuide/index.html'>HDFView 3.3.2 UsersGuide</a></li>
+</ul>
+</body></html>