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V0.1 update #13

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merged 2 commits into from
Jan 17, 2025
Merged

V0.1 update #13

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8a9b3b3
Update submission template to use nci module v0.1
caitlinadams Jan 17, 2025
a3641b6
Update submission template to point to module source
caitlinadams Jan 17, 2025
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6 changes: 3 additions & 3 deletions sar_antarctica/nci/submission/pyrosar_gamma/pyrosar_gamma.txt
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Expand Up @@ -13,15 +13,15 @@

# Load the module
module use /g/data/yp75/modules/modulefiles
module load sar-antarctica/test-20250108
module load sar-antarctica/v0.1

# Activate micromamba environment
micromamba activate sar-antarctica

# Run preparation script
cd /g/data/yp75/ca6983/repositories/sar-antarctica/sar_antarctica/nci/preparation/
cd /g/data/yp75/modules/sar-antarctica/v0.1/sar-antarctica/sar_antarctica/nci/preparation/
python create_config.py <SCENE_ID> <SCENE_CONFIG>

# Run preocessing script
cd /g/data/yp75/ca6983/repositories/sar-antarctica/sar_antarctica/nci/processing/pyroSAR/
cd /g/data/yp75/modules/sar-antarctica/v0.1/sar-antarctica/sar_antarctica/nci/processing/pyroSAR/
python pyrosar_geocode.py <WORKFLOW_CONFIG> <SCENE_CONFIG>
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